Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh17E9PXF0 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh17E9PXF0 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh17E9PXF0 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh17E9PXF0 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
Pcdh17E9PXF0 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh17E9PXF0 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh17E9PXF0 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Pcdh17E9PXF0 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC14.64□□□□□ -0.07
Pcdh17E9PXF0 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC14.64□□□□□ -0.07
Pcdh17E9PXF0 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC14.64□□□□□ -0.07
Pcdh17E9PXF0 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh17E9PXF0 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh17E9PXF0 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh17E9PXF0 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
Pcdh17E9PXF0 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh17E9PXF0 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh17E9PXF0 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Pcdh17E9PXF0 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh17E9PXF0 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh17E9PXF0 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh17E9PXF0 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.64□□□□□ -0.07
Pcdh17E9PXF0 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh17E9PXF0 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh17E9PXF0 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Pcdh17E9PXF0 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh17E9PXF0 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh17E9PXF0 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh17E9PXF0 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh17E9PXF0 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Pcdh17E9PXF0 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh17E9PXF0 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh17E9PXF0 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Pcdh17E9PXF0 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh17E9PXF0 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh17E9PXF0 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh17E9PXF0 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Pcdh17E9PXF0 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh17E9PXF0 Gm43073-201ENSMUST00000198200 1189 ntBASIC14.63□□□□□ -0.07
Pcdh17E9PXF0 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh17E9PXF0 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC14.63□□□□□ -0.07
Pcdh17E9PXF0 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC14.63□□□□□ -0.07
Pcdh17E9PXF0 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh17E9PXF0 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Pcdh17E9PXF0 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh17E9PXF0 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh17E9PXF0 Gm36858-201ENSMUST00000194501 2391 ntBASIC14.63□□□□□ -0.07
Pcdh17E9PXF0 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh17E9PXF0 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh17E9PXF0 Gm3928-201ENSMUST00000121141 1307 ntBASIC14.63□□□□□ -0.07
Pcdh17E9PXF0 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh17E9PXF0 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh17E9PXF0 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh17E9PXF0 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh17E9PXF0 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh17E9PXF0 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh17E9PXF0 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh17E9PXF0 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh17E9PXF0 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh17E9PXF0 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh17E9PXF0 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh17E9PXF0 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh17E9PXF0 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh17E9PXF0 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14.62□□□□□ -0.07
Pcdh17E9PXF0 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh17E9PXF0 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC14.62□□□□□ -0.07
Pcdh17E9PXF0 Gm7222-201ENSMUST00000117512 906 ntBASIC14.62□□□□□ -0.07
Pcdh17E9PXF0 Gm11779-201ENSMUST00000118541 368 ntBASIC14.62□□□□□ -0.07
Pcdh17E9PXF0 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh17E9PXF0 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh17E9PXF0 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh17E9PXF0 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Pcdh17E9PXF0 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh17E9PXF0 Gm43332-201ENSMUST00000202511 1044 ntBASIC14.62□□□□□ -0.07
Pcdh17E9PXF0 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh17E9PXF0 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh17E9PXF0 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.62□□□□□ -0.07
Pcdh17E9PXF0 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh17E9PXF0 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh17E9PXF0 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh17E9PXF0 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh17E9PXF0 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh17E9PXF0 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh17E9PXF0 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh17E9PXF0 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh17E9PXF0 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh17E9PXF0 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh17E9PXF0 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh17E9PXF0 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh17E9PXF0 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh17E9PXF0 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Pcdh17E9PXF0 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh17E9PXF0 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh17E9PXF0 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh17E9PXF0 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Pcdh17E9PXF0 Gm13036-201ENSMUST00000117799 748 ntBASIC14.61□□□□□ -0.07
Pcdh17E9PXF0 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC14.61□□□□□ -0.07
Pcdh17E9PXF0 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC14.61□□□□□ -0.07
Pcdh17E9PXF0 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh17E9PXF0 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms