Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Col6a3E9PWQ3 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC15.61■□□□□ 0.09
Col6a3E9PWQ3 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC15.61■□□□□ 0.09
Col6a3E9PWQ3 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col6a3E9PWQ3 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC15.61■□□□□ 0.09
Col6a3E9PWQ3 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col6a3E9PWQ3 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col6a3E9PWQ3 Gm4984-201ENSMUST00000115987 360 ntBASIC15.61■□□□□ 0.09
Col6a3E9PWQ3 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC15.61■□□□□ 0.09
Col6a3E9PWQ3 Gm22902-201ENSMUST00000158488 302 ntBASIC15.61■□□□□ 0.09
Col6a3E9PWQ3 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC15.61■□□□□ 0.09
Col6a3E9PWQ3 AC151836.1-202ENSMUST00000226259 753 ntBASIC15.61■□□□□ 0.09
Col6a3E9PWQ3 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Col6a3E9PWQ3 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col6a3E9PWQ3 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC15.6■□□□□ 0.09
Col6a3E9PWQ3 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col6a3E9PWQ3 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Col6a3E9PWQ3 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC15.6■□□□□ 0.09
Col6a3E9PWQ3 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col6a3E9PWQ3 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Col6a3E9PWQ3 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col6a3E9PWQ3 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col6a3E9PWQ3 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col6a3E9PWQ3 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col6a3E9PWQ3 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col6a3E9PWQ3 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col6a3E9PWQ3 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC15.6■□□□□ 0.09
Col6a3E9PWQ3 Gm9728-201ENSMUST00000200197 1055 ntBASIC15.6■□□□□ 0.09
Col6a3E9PWQ3 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col6a3E9PWQ3 Shd-206ENSMUST00000225145 998 ntBASIC15.6■□□□□ 0.09
Col6a3E9PWQ3 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Col6a3E9PWQ3 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Col6a3E9PWQ3 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col6a3E9PWQ3 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Col6a3E9PWQ3 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col6a3E9PWQ3 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Col6a3E9PWQ3 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC15.6■□□□□ 0.09
Col6a3E9PWQ3 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col6a3E9PWQ3 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col6a3E9PWQ3 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col6a3E9PWQ3 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col6a3E9PWQ3 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col6a3E9PWQ3 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col6a3E9PWQ3 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col6a3E9PWQ3 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
Col6a3E9PWQ3 Gm8801-201ENSMUST00000173255 1064 ntBASIC15.59■□□□□ 0.09
Col6a3E9PWQ3 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col6a3E9PWQ3 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Col6a3E9PWQ3 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC15.59■□□□□ 0.09
Col6a3E9PWQ3 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col6a3E9PWQ3 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col6a3E9PWQ3 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Col6a3E9PWQ3 Gm37917-201ENSMUST00000194711 392 ntBASIC15.59■□□□□ 0.09
Col6a3E9PWQ3 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col6a3E9PWQ3 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col6a3E9PWQ3 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Col6a3E9PWQ3 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col6a3E9PWQ3 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Col6a3E9PWQ3 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Col6a3E9PWQ3 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC15.58■□□□□ 0.09
Col6a3E9PWQ3 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Col6a3E9PWQ3 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC15.58■□□□□ 0.09
Col6a3E9PWQ3 Gm12390-201ENSMUST00000117897 397 ntBASIC15.58■□□□□ 0.09
Col6a3E9PWQ3 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC15.58■□□□□ 0.09
Col6a3E9PWQ3 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC15.58■□□□□ 0.09
Col6a3E9PWQ3 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC15.58■□□□□ 0.09
Col6a3E9PWQ3 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC15.58■□□□□ 0.09
Col6a3E9PWQ3 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC15.58■□□□□ 0.09
Col6a3E9PWQ3 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
Col6a3E9PWQ3 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Col6a3E9PWQ3 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Col6a3E9PWQ3 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Col6a3E9PWQ3 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Col6a3E9PWQ3 Gm18222-201ENSMUST00000202416 1387 ntBASIC15.58■□□□□ 0.08
Col6a3E9PWQ3 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Col6a3E9PWQ3 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC15.58■□□□□ 0.08
Col6a3E9PWQ3 AU022133-201ENSMUST00000200601 873 ntBASIC15.58■□□□□ 0.08
Col6a3E9PWQ3 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC15.58■□□□□ 0.08
Col6a3E9PWQ3 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Col6a3E9PWQ3 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Col6a3E9PWQ3 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Col6a3E9PWQ3 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Col6a3E9PWQ3 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Col6a3E9PWQ3 Gm4875-201ENSMUST00000118257 786 ntBASIC15.58■□□□□ 0.08
Col6a3E9PWQ3 Gm15808-201ENSMUST00000119046 604 ntBASIC15.58■□□□□ 0.08
Col6a3E9PWQ3 Gm14660-201ENSMUST00000119809 575 ntBASIC15.58■□□□□ 0.08
Col6a3E9PWQ3 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Col6a3E9PWQ3 Gm44974-201ENSMUST00000206387 1279 ntBASIC15.58■□□□□ 0.08
Col6a3E9PWQ3 Gm20445-201ENSMUST00000061905 565 ntBASIC15.58■□□□□ 0.08
Col6a3E9PWQ3 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Col6a3E9PWQ3 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Col6a3E9PWQ3 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col6a3E9PWQ3 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC15.57■□□□□ 0.08
Col6a3E9PWQ3 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.57■□□□□ 0.08
Col6a3E9PWQ3 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC15.57■□□□□ 0.08
Col6a3E9PWQ3 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC15.57■□□□□ 0.08
Col6a3E9PWQ3 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Col6a3E9PWQ3 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC15.57■□□□□ 0.08
Col6a3E9PWQ3 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col6a3E9PWQ3 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms