Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
Gm28043E0CXC2 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Gm28043E0CXC2 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC15.83■□□□□ 0.12
Gm28043E0CXC2 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC15.83■□□□□ 0.12
Gm28043E0CXC2 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Gm28043E0CXC2 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Gm28043E0CXC2 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Gm28043E0CXC2 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Gm28043E0CXC2 Gm9013-201ENSMUST00000132939 882 ntBASIC15.83■□□□□ 0.12
Gm28043E0CXC2 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Gm28043E0CXC2 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC15.83■□□□□ 0.12
Gm28043E0CXC2 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Gm28043E0CXC2 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
Gm28043E0CXC2 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Gm28043E0CXC2 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Gm28043E0CXC2 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Gm28043E0CXC2 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Gm28043E0CXC2 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Gm28043E0CXC2 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Gm28043E0CXC2 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Gm28043E0CXC2 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Gm28043E0CXC2 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Gm28043E0CXC2 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Gm28043E0CXC2 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Gm28043E0CXC2 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Gm28043E0CXC2 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Gm28043E0CXC2 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Gm28043E0CXC2 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Gm28043E0CXC2 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Gm28043E0CXC2 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Gm28043E0CXC2 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Gm28043E0CXC2 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Gm28043E0CXC2 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Gm28043E0CXC2 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Gm28043E0CXC2 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Gm28043E0CXC2 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Gm28043E0CXC2 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Gm28043E0CXC2 Gm6659-201ENSMUST00000174752 547 ntBASIC15.82■□□□□ 0.12
Gm28043E0CXC2 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC15.82■□□□□ 0.12
Gm28043E0CXC2 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Gm28043E0CXC2 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Gm28043E0CXC2 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Gm28043E0CXC2 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Gm28043E0CXC2 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC15.82■□□□□ 0.12
Gm28043E0CXC2 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC15.82■□□□□ 0.12
Gm28043E0CXC2 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Gm28043E0CXC2 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Gm28043E0CXC2 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Gm28043E0CXC2 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Gm28043E0CXC2 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Gm28043E0CXC2 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Gm28043E0CXC2 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Gm28043E0CXC2 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Gm28043E0CXC2 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Gm28043E0CXC2 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Gm28043E0CXC2 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Gm28043E0CXC2 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Gm28043E0CXC2 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC15.81■□□□□ 0.12
Gm28043E0CXC2 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Gm28043E0CXC2 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Gm28043E0CXC2 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Gm28043E0CXC2 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Gm28043E0CXC2 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Gm28043E0CXC2 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC15.81■□□□□ 0.12
Gm28043E0CXC2 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Gm28043E0CXC2 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Gm28043E0CXC2 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Gm28043E0CXC2 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Gm28043E0CXC2 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Gm28043E0CXC2 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Gm28043E0CXC2 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC15.81■□□□□ 0.12
Gm28043E0CXC2 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC15.81■□□□□ 0.12
Gm28043E0CXC2 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Gm28043E0CXC2 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Gm28043E0CXC2 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Gm28043E0CXC2 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Gm28043E0CXC2 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Gm28043E0CXC2 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Gm28043E0CXC2 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Gm28043E0CXC2 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Gm28043E0CXC2 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Gm28043E0CXC2 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Gm28043E0CXC2 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Gm28043E0CXC2 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Gm28043E0CXC2 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Gm28043E0CXC2 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Gm28043E0CXC2 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Gm28043E0CXC2 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC15.8■□□□□ 0.12
Gm28043E0CXC2 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Gm28043E0CXC2 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Gm28043E0CXC2 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC15.8■□□□□ 0.12
Gm28043E0CXC2 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC15.8■□□□□ 0.12
Gm28043E0CXC2 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Gm28043E0CXC2 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Gm28043E0CXC2 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Gm28043E0CXC2 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Gm28043E0CXC2 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Gm28043E0CXC2 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Gm28043E0CXC2 Ccdc166-201ENSMUST00000182172 2584 ntBASIC15.8■□□□□ 0.12
Gm28043E0CXC2 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms