Protein–RNA interactions for Protein: D3Z235

Gm3543, Predicted gene 3543, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3543D3Z235 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm3543D3Z235 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC14.25□□□□□ -0.13
Gm3543D3Z235 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Gm3543D3Z235 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm3543D3Z235 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm3543D3Z235 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gm3543D3Z235 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Gm3543D3Z235 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Gm3543D3Z235 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm3543D3Z235 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Gm3543D3Z235 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm3543D3Z235 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Gm3543D3Z235 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm3543D3Z235 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Gm3543D3Z235 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm3543D3Z235 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm3543D3Z235 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm3543D3Z235 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.24□□□□□ -0.13
Gm3543D3Z235 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
Gm3543D3Z235 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm3543D3Z235 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Gm3543D3Z235 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC14.24□□□□□ -0.13
Gm3543D3Z235 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC14.24□□□□□ -0.13
Gm3543D3Z235 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC14.24□□□□□ -0.13
Gm3543D3Z235 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC14.24□□□□□ -0.13
Gm3543D3Z235 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm3543D3Z235 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
Gm3543D3Z235 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Gm3543D3Z235 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Gm3543D3Z235 Slc35b2-202ENSMUST00000223987 1766 ntBASIC14.24□□□□□ -0.13
Gm3543D3Z235 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm3543D3Z235 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm3543D3Z235 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm3543D3Z235 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
Gm3543D3Z235 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm3543D3Z235 Gm9889-202ENSMUST00000206983 1577 ntBASIC14.23□□□□□ -0.13
Gm3543D3Z235 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm3543D3Z235 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Gm3543D3Z235 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm3543D3Z235 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC14.23□□□□□ -0.13
Gm3543D3Z235 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC14.23□□□□□ -0.13
Gm3543D3Z235 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Gm3543D3Z235 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm3543D3Z235 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.23□□□□□ -0.13
Gm3543D3Z235 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC14.23□□□□□ -0.13
Gm3543D3Z235 AC159301.1-201ENSMUST00000225130 1182 ntBASIC14.23□□□□□ -0.13
Gm3543D3Z235 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm3543D3Z235 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm3543D3Z235 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm3543D3Z235 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm3543D3Z235 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm3543D3Z235 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm3543D3Z235 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Gm3543D3Z235 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
Gm3543D3Z235 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm3543D3Z235 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm3543D3Z235 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm3543D3Z235 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm3543D3Z235 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm3543D3Z235 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Gm3543D3Z235 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm3543D3Z235 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Gm3543D3Z235 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm3543D3Z235 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm3543D3Z235 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm3543D3Z235 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm3543D3Z235 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm3543D3Z235 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm3543D3Z235 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm3543D3Z235 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
Gm3543D3Z235 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm3543D3Z235 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm3543D3Z235 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm3543D3Z235 AC164629.2-201ENSMUST00000217916 270 ntBASIC14.22□□□□□ -0.13
Gm3543D3Z235 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Gm3543D3Z235 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Gm3543D3Z235 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm3543D3Z235 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm3543D3Z235 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm3543D3Z235 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm3543D3Z235 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm3543D3Z235 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm3543D3Z235 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Gm3543D3Z235 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm3543D3Z235 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm3543D3Z235 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm3543D3Z235 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Gm3543D3Z235 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm3543D3Z235 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm3543D3Z235 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm3543D3Z235 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm3543D3Z235 Gm44616-201ENSMUST00000206417 1732 ntBASIC14.21□□□□□ -0.13
Gm3543D3Z235 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC14.21□□□□□ -0.13
Gm3543D3Z235 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gm3543D3Z235 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gm3543D3Z235 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gm3543D3Z235 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gm3543D3Z235 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
Gm3543D3Z235 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC14.21□□□□□ -0.13
Gm3543D3Z235 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms