Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shank1D3YZU1 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Shank1D3YZU1 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shank1D3YZU1 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shank1D3YZU1 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC14.07□□□□□ -0.16
Shank1D3YZU1 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Shank1D3YZU1 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shank1D3YZU1 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC14.07□□□□□ -0.16
Shank1D3YZU1 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shank1D3YZU1 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shank1D3YZU1 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shank1D3YZU1 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC14.07□□□□□ -0.16
Shank1D3YZU1 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Shank1D3YZU1 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shank1D3YZU1 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Shank1D3YZU1 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC14.07□□□□□ -0.16
Shank1D3YZU1 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Shank1D3YZU1 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shank1D3YZU1 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Shank1D3YZU1 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shank1D3YZU1 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.06□□□□□ -0.16
Shank1D3YZU1 Gm13365-201ENSMUST00000121188 973 ntBASIC14.06□□□□□ -0.16
Shank1D3YZU1 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC14.06□□□□□ -0.16
Shank1D3YZU1 Gm7787-201ENSMUST00000216858 688 ntBASIC14.06□□□□□ -0.16
Shank1D3YZU1 Arhgef33-209ENSMUST00000225223 714 ntBASIC14.06□□□□□ -0.16
Shank1D3YZU1 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shank1D3YZU1 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Shank1D3YZU1 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shank1D3YZU1 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC14.06□□□□□ -0.16
Shank1D3YZU1 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shank1D3YZU1 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Shank1D3YZU1 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Shank1D3YZU1 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Shank1D3YZU1 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shank1D3YZU1 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Shank1D3YZU1 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shank1D3YZU1 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Shank1D3YZU1 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shank1D3YZU1 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shank1D3YZU1 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shank1D3YZU1 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shank1D3YZU1 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shank1D3YZU1 Gm12428-201ENSMUST00000119844 727 ntBASIC14.06□□□□□ -0.16
Shank1D3YZU1 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shank1D3YZU1 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC14.06□□□□□ -0.16
Shank1D3YZU1 Gm25948-201ENSMUST00000175334 112 ntBASIC14.06□□□□□ -0.16
Shank1D3YZU1 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.06□□□□□ -0.16
Shank1D3YZU1 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14.06□□□□□ -0.16
Shank1D3YZU1 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shank1D3YZU1 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shank1D3YZU1 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Shank1D3YZU1 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shank1D3YZU1 Grk6-207ENSMUST00000225925 2769 ntBASIC14.06□□□□□ -0.16
Shank1D3YZU1 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Shank1D3YZU1 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Shank1D3YZU1 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Shank1D3YZU1 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shank1D3YZU1 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shank1D3YZU1 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shank1D3YZU1 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shank1D3YZU1 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shank1D3YZU1 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shank1D3YZU1 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shank1D3YZU1 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shank1D3YZU1 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Shank1D3YZU1 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shank1D3YZU1 Gm11424-201ENSMUST00000121929 829 ntBASIC14.05□□□□□ -0.16
Shank1D3YZU1 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
Shank1D3YZU1 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Shank1D3YZU1 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shank1D3YZU1 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.05□□□□□ -0.16
Shank1D3YZU1 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shank1D3YZU1 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shank1D3YZU1 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shank1D3YZU1 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Shank1D3YZU1 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shank1D3YZU1 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Shank1D3YZU1 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shank1D3YZU1 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC14.05□□□□□ -0.16
Shank1D3YZU1 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shank1D3YZU1 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Shank1D3YZU1 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shank1D3YZU1 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Shank1D3YZU1 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shank1D3YZU1 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC14.04□□□□□ -0.16
Shank1D3YZU1 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shank1D3YZU1 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shank1D3YZU1 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Shank1D3YZU1 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC14.04□□□□□ -0.16
Shank1D3YZU1 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shank1D3YZU1 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
Shank1D3YZU1 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shank1D3YZU1 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Shank1D3YZU1 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Shank1D3YZU1 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.04□□□□□ -0.16
Shank1D3YZU1 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC14.04□□□□□ -0.16
Shank1D3YZU1 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Shank1D3YZU1 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC14.04□□□□□ -0.16
Shank1D3YZU1 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shank1D3YZU1 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms