Protein–RNA interactions for Protein: B9EKI3

Tmf1, TATA element modulatory factor, mousemouse

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmf1B9EKI3 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Tmf1B9EKI3 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Tmf1B9EKI3 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Tmf1B9EKI3 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Tmf1B9EKI3 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Tmf1B9EKI3 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Tmf1B9EKI3 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Tmf1B9EKI3 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Tmf1B9EKI3 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Tmf1B9EKI3 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC21.26■□□□□ 0.99
Tmf1B9EKI3 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Tmf1B9EKI3 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
Tmf1B9EKI3 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Tmf1B9EKI3 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Tmf1B9EKI3 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC21.26■□□□□ 0.99
Tmf1B9EKI3 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC21.26■□□□□ 0.99
Tmf1B9EKI3 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Tmf1B9EKI3 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC21.26■□□□□ 0.99
Tmf1B9EKI3 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC21.26■□□□□ 0.99
Tmf1B9EKI3 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Tmf1B9EKI3 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Tmf1B9EKI3 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC21.26■□□□□ 0.99
Tmf1B9EKI3 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Tmf1B9EKI3 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Tmf1B9EKI3 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC21.26■□□□□ 0.99
Tmf1B9EKI3 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Tmf1B9EKI3 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Tmf1B9EKI3 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC21.25■□□□□ 0.99
Tmf1B9EKI3 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC21.25■□□□□ 0.99
Tmf1B9EKI3 AC154527.4-201ENSMUST00000224364 1667 ntBASIC21.25■□□□□ 0.99
Tmf1B9EKI3 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Tmf1B9EKI3 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Tmf1B9EKI3 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC21.25■□□□□ 0.99
Tmf1B9EKI3 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC21.25■□□□□ 0.99
Tmf1B9EKI3 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Tmf1B9EKI3 AC122024.2-201ENSMUST00000220086 871 ntBASIC21.25■□□□□ 0.99
Tmf1B9EKI3 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Tmf1B9EKI3 Gm15590-201ENSMUST00000078419 552 ntBASIC21.25■□□□□ 0.99
Tmf1B9EKI3 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Tmf1B9EKI3 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Tmf1B9EKI3 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Tmf1B9EKI3 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Tmf1B9EKI3 AC069562.2-201ENSMUST00000224644 2146 ntBASIC21.25■□□□□ 0.99
Tmf1B9EKI3 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Tmf1B9EKI3 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Tmf1B9EKI3 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Tmf1B9EKI3 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Tmf1B9EKI3 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Tmf1B9EKI3 Grk6-207ENSMUST00000225925 2769 ntBASIC21.24■□□□□ 0.99
Tmf1B9EKI3 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Tmf1B9EKI3 Gm13036-201ENSMUST00000117799 748 ntBASIC21.24■□□□□ 0.99
Tmf1B9EKI3 Gm11764-201ENSMUST00000120221 623 ntBASIC21.24■□□□□ 0.99
Tmf1B9EKI3 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Tmf1B9EKI3 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC21.24■□□□□ 0.99
Tmf1B9EKI3 Gm37153-201ENSMUST00000193637 231 ntBASIC21.24■□□□□ 0.99
Tmf1B9EKI3 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Tmf1B9EKI3 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Tmf1B9EKI3 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Tmf1B9EKI3 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Tmf1B9EKI3 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Tmf1B9EKI3 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Tmf1B9EKI3 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Tmf1B9EKI3 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Tmf1B9EKI3 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Tmf1B9EKI3 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Tmf1B9EKI3 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Tmf1B9EKI3 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC21.23■□□□□ 0.99
Tmf1B9EKI3 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC21.23■□□□□ 0.99
Tmf1B9EKI3 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC21.23■□□□□ 0.99
Tmf1B9EKI3 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Tmf1B9EKI3 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC21.23■□□□□ 0.99
Tmf1B9EKI3 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Tmf1B9EKI3 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC21.23■□□□□ 0.99
Tmf1B9EKI3 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Tmf1B9EKI3 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Tmf1B9EKI3 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Tmf1B9EKI3 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Tmf1B9EKI3 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Tmf1B9EKI3 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC21.23■□□□□ 0.99
Tmf1B9EKI3 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Tmf1B9EKI3 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tmf1B9EKI3 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tmf1B9EKI3 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Tmf1B9EKI3 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Tmf1B9EKI3 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tmf1B9EKI3 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
Tmf1B9EKI3 Gm6184-201ENSMUST00000120403 1261 ntBASIC21.22■□□□□ 0.99
Tmf1B9EKI3 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
Tmf1B9EKI3 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tmf1B9EKI3 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Tmf1B9EKI3 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC21.22■□□□□ 0.99
Tmf1B9EKI3 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Tmf1B9EKI3 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tmf1B9EKI3 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tmf1B9EKI3 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Tmf1B9EKI3 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Tmf1B9EKI3 Gm13337-201ENSMUST00000119183 1594 ntBASIC21.22■□□□□ 0.99
Tmf1B9EKI3 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tmf1B9EKI3 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tmf1B9EKI3 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms