Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col6a5A6H584 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col6a5A6H584 Gm10478-201ENSMUST00000084451 396 ntBASIC11.81□□□□□ -0.52
Col6a5A6H584 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Col6a5A6H584 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col6a5A6H584 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col6a5A6H584 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col6a5A6H584 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Col6a5A6H584 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Col6a5A6H584 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col6a5A6H584 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col6a5A6H584 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC11.81□□□□□ -0.52
Col6a5A6H584 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col6a5A6H584 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col6a5A6H584 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col6a5A6H584 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Col6a5A6H584 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col6a5A6H584 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC11.8□□□□□ -0.52
Col6a5A6H584 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col6a5A6H584 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col6a5A6H584 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col6a5A6H584 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Col6a5A6H584 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Col6a5A6H584 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC11.8□□□□□ -0.52
Col6a5A6H584 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col6a5A6H584 Gm6627-201ENSMUST00000218299 2386 ntBASIC11.8□□□□□ -0.52
Col6a5A6H584 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Col6a5A6H584 Gm6263-201ENSMUST00000120029 1342 ntBASIC11.8□□□□□ -0.52
Col6a5A6H584 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col6a5A6H584 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC11.8□□□□□ -0.52
Col6a5A6H584 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col6a5A6H584 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col6a5A6H584 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Col6a5A6H584 Asic1-205ENSMUST00000228185 1818 ntBASIC11.8□□□□□ -0.52
Col6a5A6H584 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col6a5A6H584 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col6a5A6H584 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col6a5A6H584 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC11.8□□□□□ -0.52
Col6a5A6H584 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Col6a5A6H584 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col6a5A6H584 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col6a5A6H584 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col6a5A6H584 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col6a5A6H584 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col6a5A6H584 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col6a5A6H584 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col6a5A6H584 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col6a5A6H584 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col6a5A6H584 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col6a5A6H584 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC11.79□□□□□ -0.52
Col6a5A6H584 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC11.79□□□□□ -0.52
Col6a5A6H584 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Col6a5A6H584 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC11.79□□□□□ -0.52
Col6a5A6H584 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC11.79□□□□□ -0.52
Col6a5A6H584 Gm43703-201ENSMUST00000200523 763 ntBASIC11.79□□□□□ -0.52
Col6a5A6H584 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC11.79□□□□□ -0.52
Col6a5A6H584 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC11.79□□□□□ -0.52
Col6a5A6H584 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC11.79□□□□□ -0.52
Col6a5A6H584 CT009713.10-202ENSMUST00000225734 696 ntBASIC11.79□□□□□ -0.52
Col6a5A6H584 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col6a5A6H584 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Col6a5A6H584 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col6a5A6H584 Gm42853-201ENSMUST00000201273 1387 ntBASIC11.79□□□□□ -0.52
Col6a5A6H584 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col6a5A6H584 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col6a5A6H584 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Col6a5A6H584 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC11.79□□□□□ -0.52
Col6a5A6H584 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col6a5A6H584 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col6a5A6H584 Gm14042-201ENSMUST00000120139 833 ntBASIC11.79□□□□□ -0.52
Col6a5A6H584 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC11.79□□□□□ -0.52
Col6a5A6H584 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC11.79□□□□□ -0.52
Col6a5A6H584 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Col6a5A6H584 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC11.79□□□□□ -0.52
Col6a5A6H584 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Col6a5A6H584 CT485787.1-201ENSMUST00000225617 968 ntBASIC11.79□□□□□ -0.52
Col6a5A6H584 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col6a5A6H584 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col6a5A6H584 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Col6a5A6H584 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col6a5A6H584 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col6a5A6H584 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col6a5A6H584 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col6a5A6H584 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Col6a5A6H584 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col6a5A6H584 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col6a5A6H584 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col6a5A6H584 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col6a5A6H584 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col6a5A6H584 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col6a5A6H584 Gm15236-201ENSMUST00000117309 379 ntBASIC11.78□□□□□ -0.52
Col6a5A6H584 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC11.78□□□□□ -0.52
Col6a5A6H584 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC11.78□□□□□ -0.52
Col6a5A6H584 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Col6a5A6H584 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC11.78□□□□□ -0.52
Col6a5A6H584 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col6a5A6H584 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col6a5A6H584 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col6a5A6H584 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC11.78□□□□□ -0.52
Col6a5A6H584 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms