Protein–RNA interactions for Protein: A2ALU4

Shroom2, Protein Shroom2, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2A2ALU4 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Shroom2A2ALU4 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Shroom2A2ALU4 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC24.58■■□□□ 1.52
Shroom2A2ALU4 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
Shroom2A2ALU4 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.52
Shroom2A2ALU4 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC24.58■■□□□ 1.52
Shroom2A2ALU4 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
Shroom2A2ALU4 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
Shroom2A2ALU4 Gm10478-201ENSMUST00000084451 396 ntBASIC24.58■■□□□ 1.52
Shroom2A2ALU4 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Shroom2A2ALU4 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC24.57■■□□□ 1.52
Shroom2A2ALU4 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC24.57■■□□□ 1.52
Shroom2A2ALU4 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Shroom2A2ALU4 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Shroom2A2ALU4 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Shroom2A2ALU4 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Shroom2A2ALU4 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Shroom2A2ALU4 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC24.57■■□□□ 1.52
Shroom2A2ALU4 Gm12960-201ENSMUST00000120017 1066 ntBASIC24.57■■□□□ 1.52
Shroom2A2ALU4 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC24.57■■□□□ 1.52
Shroom2A2ALU4 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Shroom2A2ALU4 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Shroom2A2ALU4 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
Shroom2A2ALU4 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
Shroom2A2ALU4 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
Shroom2A2ALU4 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Shroom2A2ALU4 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Shroom2A2ALU4 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC24.56■■□□□ 1.52
Shroom2A2ALU4 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
Shroom2A2ALU4 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Shroom2A2ALU4 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC24.56■■□□□ 1.52
Shroom2A2ALU4 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Shroom2A2ALU4 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC24.56■■□□□ 1.52
Shroom2A2ALU4 AC162801.1-201ENSMUST00000220612 198 ntBASIC24.56■■□□□ 1.52
Shroom2A2ALU4 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Shroom2A2ALU4 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Shroom2A2ALU4 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Shroom2A2ALU4 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Shroom2A2ALU4 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Shroom2A2ALU4 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Shroom2A2ALU4 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
Shroom2A2ALU4 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC24.55■■□□□ 1.52
Shroom2A2ALU4 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Shroom2A2ALU4 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
Shroom2A2ALU4 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC24.55■■□□□ 1.52
Shroom2A2ALU4 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC24.55■■□□□ 1.52
Shroom2A2ALU4 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC24.55■■□□□ 1.52
Shroom2A2ALU4 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Shroom2A2ALU4 Snora78-201ENSMUST00000158630 128 ntBASIC24.55■■□□□ 1.52
Shroom2A2ALU4 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC24.55■■□□□ 1.52
Shroom2A2ALU4 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC24.55■■□□□ 1.52
Shroom2A2ALU4 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC24.55■■□□□ 1.52
Shroom2A2ALU4 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Shroom2A2ALU4 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Shroom2A2ALU4 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Shroom2A2ALU4 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Shroom2A2ALU4 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC24.54■■□□□ 1.52
Shroom2A2ALU4 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC24.54■■□□□ 1.52
Shroom2A2ALU4 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
Shroom2A2ALU4 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Shroom2A2ALU4 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Shroom2A2ALU4 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC24.54■■□□□ 1.52
Shroom2A2ALU4 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC24.54■■□□□ 1.52
Shroom2A2ALU4 Gm43179-201ENSMUST00000198797 275 ntBASIC24.54■■□□□ 1.52
Shroom2A2ALU4 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Shroom2A2ALU4 Gm8399-201ENSMUST00000082300 1117 ntBASIC24.54■■□□□ 1.52
Shroom2A2ALU4 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Shroom2A2ALU4 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Shroom2A2ALU4 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Shroom2A2ALU4 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Shroom2A2ALU4 Gm5320-201ENSMUST00000207163 1519 ntBASIC24.54■■□□□ 1.52
Shroom2A2ALU4 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Shroom2A2ALU4 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC24.54■■□□□ 1.52
Shroom2A2ALU4 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Shroom2A2ALU4 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Shroom2A2ALU4 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Shroom2A2ALU4 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC24.53■■□□□ 1.52
Shroom2A2ALU4 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Shroom2A2ALU4 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC24.53■■□□□ 1.52
Shroom2A2ALU4 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Shroom2A2ALU4 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Shroom2A2ALU4 Gm42939-201ENSMUST00000197514 2205 ntBASIC24.53■■□□□ 1.52
Shroom2A2ALU4 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Shroom2A2ALU4 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Shroom2A2ALU4 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Shroom2A2ALU4 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC24.52■■□□□ 1.52
Shroom2A2ALU4 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Shroom2A2ALU4 Rn7s1-201ENSMUST00000174924 300 ntBASIC24.52■■□□□ 1.52
Shroom2A2ALU4 Rn7s2-201ENSMUST00000175032 300 ntBASIC24.52■■□□□ 1.52
Shroom2A2ALU4 Gm26461-201ENSMUST00000175064 290 ntBASIC24.52■■□□□ 1.52
Shroom2A2ALU4 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC24.52■■□□□ 1.52
Shroom2A2ALU4 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Shroom2A2ALU4 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
Shroom2A2ALU4 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Shroom2A2ALU4 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
Shroom2A2ALU4 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Shroom2A2ALU4 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Shroom2A2ALU4 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
Shroom2A2ALU4 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC24.52■■□□□ 1.52
Shroom2A2ALU4 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms