Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav12-1A0N8R1 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav12-1A0N8R1 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC13.16□□□□□ -0.3
Trav12-1A0N8R1 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav12-1A0N8R1 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
Trav12-1A0N8R1 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav12-1A0N8R1 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav12-1A0N8R1 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav12-1A0N8R1 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav12-1A0N8R1 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav12-1A0N8R1 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav12-1A0N8R1 Gm11860-201ENSMUST00000122346 1010 ntBASIC13.16□□□□□ -0.3
Trav12-1A0N8R1 Gm18101-201ENSMUST00000215769 548 ntBASIC13.16□□□□□ -0.3
Trav12-1A0N8R1 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC13.16□□□□□ -0.3
Trav12-1A0N8R1 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav12-1A0N8R1 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav12-1A0N8R1 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav12-1A0N8R1 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav12-1A0N8R1 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC13.16□□□□□ -0.3
Trav12-1A0N8R1 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav12-1A0N8R1 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Trav12-1A0N8R1 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav12-1A0N8R1 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav12-1A0N8R1 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trav12-1A0N8R1 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav12-1A0N8R1 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav12-1A0N8R1 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav12-1A0N8R1 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav12-1A0N8R1 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav12-1A0N8R1 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav12-1A0N8R1 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav12-1A0N8R1 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav12-1A0N8R1 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC13.15□□□□□ -0.3
Trav12-1A0N8R1 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav12-1A0N8R1 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC13.15□□□□□ -0.3
Trav12-1A0N8R1 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC13.15□□□□□ -0.3
Trav12-1A0N8R1 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC13.15□□□□□ -0.3
Trav12-1A0N8R1 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Trav12-1A0N8R1 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC13.15□□□□□ -0.3
Trav12-1A0N8R1 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC13.15□□□□□ -0.3
Trav12-1A0N8R1 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav12-1A0N8R1 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav12-1A0N8R1 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav12-1A0N8R1 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trav12-1A0N8R1 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trav12-1A0N8R1 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav12-1A0N8R1 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav12-1A0N8R1 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav12-1A0N8R1 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav12-1A0N8R1 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav12-1A0N8R1 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav12-1A0N8R1 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav12-1A0N8R1 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav12-1A0N8R1 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav12-1A0N8R1 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC13.14□□□□□ -0.31
Trav12-1A0N8R1 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav12-1A0N8R1 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav12-1A0N8R1 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Trav12-1A0N8R1 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav12-1A0N8R1 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav12-1A0N8R1 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav12-1A0N8R1 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav12-1A0N8R1 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav12-1A0N8R1 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Trav12-1A0N8R1 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav12-1A0N8R1 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC13.14□□□□□ -0.31
Trav12-1A0N8R1 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC13.14□□□□□ -0.31
Trav12-1A0N8R1 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav12-1A0N8R1 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC13.14□□□□□ -0.31
Trav12-1A0N8R1 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav12-1A0N8R1 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav12-1A0N8R1 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
Trav12-1A0N8R1 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Trav12-1A0N8R1 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav12-1A0N8R1 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav12-1A0N8R1 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav12-1A0N8R1 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC13.14□□□□□ -0.31
Trav12-1A0N8R1 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC13.14□□□□□ -0.31
Trav12-1A0N8R1 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav12-1A0N8R1 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Trav12-1A0N8R1 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav12-1A0N8R1 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav12-1A0N8R1 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav12-1A0N8R1 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav12-1A0N8R1 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav12-1A0N8R1 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav12-1A0N8R1 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav12-1A0N8R1 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Trav12-1A0N8R1 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Trav12-1A0N8R1 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav12-1A0N8R1 Sybu-209ENSMUST00000228639 4113 ntBASIC13.13□□□□□ -0.31
Trav12-1A0N8R1 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Trav12-1A0N8R1 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC13.13□□□□□ -0.31
Trav12-1A0N8R1 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav12-1A0N8R1 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav12-1A0N8R1 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Trav12-1A0N8R1 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav12-1A0N8R1 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav12-1A0N8R1 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Trav12-1A0N8R1 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms