Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC12.69□□□□□ -0.38
Trav12d-1A0N8R0 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav12d-1A0N8R0 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav12d-1A0N8R0 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav12d-1A0N8R0 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav12d-1A0N8R0 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav12d-1A0N8R0 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav12d-1A0N8R0 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trav12d-1A0N8R0 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav12d-1A0N8R0 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav12d-1A0N8R0 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC12.69□□□□□ -0.38
Trav12d-1A0N8R0 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav12d-1A0N8R0 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav12d-1A0N8R0 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav12d-1A0N8R0 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Trav12d-1A0N8R0 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav12d-1A0N8R0 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav12d-1A0N8R0 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav12d-1A0N8R0 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav12d-1A0N8R0 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Trav12d-1A0N8R0 Gm43598-201ENSMUST00000202482 2479 ntBASIC12.68□□□□□ -0.38
Trav12d-1A0N8R0 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav12d-1A0N8R0 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav12d-1A0N8R0 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC12.68□□□□□ -0.38
Trav12d-1A0N8R0 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav12d-1A0N8R0 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav12d-1A0N8R0 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
Trav12d-1A0N8R0 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav12d-1A0N8R0 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav12d-1A0N8R0 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav12d-1A0N8R0 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC12.68□□□□□ -0.38
Trav12d-1A0N8R0 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC12.68□□□□□ -0.38
Trav12d-1A0N8R0 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Trav12d-1A0N8R0 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Trav12d-1A0N8R0 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC12.68□□□□□ -0.38
Trav12d-1A0N8R0 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC12.68□□□□□ -0.38
Trav12d-1A0N8R0 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC12.68□□□□□ -0.38
Trav12d-1A0N8R0 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav12d-1A0N8R0 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav12d-1A0N8R0 AC159205.6-201ENSMUST00000224935 887 ntBASIC12.68□□□□□ -0.38
Trav12d-1A0N8R0 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav12d-1A0N8R0 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav12d-1A0N8R0 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav12d-1A0N8R0 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav12d-1A0N8R0 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav12d-1A0N8R0 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav12d-1A0N8R0 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav12d-1A0N8R0 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav12d-1A0N8R0 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav12d-1A0N8R0 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav12d-1A0N8R0 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav12d-1A0N8R0 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav12d-1A0N8R0 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Trav12d-1A0N8R0 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav12d-1A0N8R0 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12d-1A0N8R0 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trav12d-1A0N8R0 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trav12d-1A0N8R0 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12d-1A0N8R0 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12d-1A0N8R0 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12d-1A0N8R0 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12d-1A0N8R0 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12d-1A0N8R0 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12d-1A0N8R0 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12d-1A0N8R0 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12d-1A0N8R0 AC174678.1-201ENSMUST00000228007 2749 ntBASIC12.67□□□□□ -0.38
Trav12d-1A0N8R0 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Trav12d-1A0N8R0 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC12.67□□□□□ -0.38
Trav12d-1A0N8R0 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Trav12d-1A0N8R0 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC12.67□□□□□ -0.38
Trav12d-1A0N8R0 Gm13436-201ENSMUST00000120418 567 ntBASIC12.67□□□□□ -0.38
Trav12d-1A0N8R0 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12d-1A0N8R0 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12d-1A0N8R0 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12d-1A0N8R0 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Trav12d-1A0N8R0 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Trav12d-1A0N8R0 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12d-1A0N8R0 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12d-1A0N8R0 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12d-1A0N8R0 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12d-1A0N8R0 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12d-1A0N8R0 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
Trav12d-1A0N8R0 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12d-1A0N8R0 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12d-1A0N8R0 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12d-1A0N8R0 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12d-1A0N8R0 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav12d-1A0N8R0 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav12d-1A0N8R0 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav12d-1A0N8R0 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC12.66□□□□□ -0.38
Trav12d-1A0N8R0 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav12d-1A0N8R0 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC12.66□□□□□ -0.38
Trav12d-1A0N8R0 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav12d-1A0N8R0 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav12d-1A0N8R0 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav12d-1A0N8R0 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav12d-1A0N8R0 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav12d-1A0N8R0 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav12d-1A0N8R0 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav12d-1A0N8R0 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms