Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Lnp1A0A1B0GSK3 Gm42901-201ENSMUST00000197735 3171 ntBASIC13.12□□□□□ -0.31
Lnp1A0A1B0GSK3 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lnp1A0A1B0GSK3 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lnp1A0A1B0GSK3 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lnp1A0A1B0GSK3 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Lnp1A0A1B0GSK3 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lnp1A0A1B0GSK3 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC13.12□□□□□ -0.31
Lnp1A0A1B0GSK3 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lnp1A0A1B0GSK3 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lnp1A0A1B0GSK3 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Lnp1A0A1B0GSK3 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lnp1A0A1B0GSK3 Gm14859-201ENSMUST00000117752 357 ntBASIC13.12□□□□□ -0.31
Lnp1A0A1B0GSK3 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC13.12□□□□□ -0.31
Lnp1A0A1B0GSK3 Mir3081-201ENSMUST00000175305 84 ntBASIC13.12□□□□□ -0.31
Lnp1A0A1B0GSK3 Mir6404-201ENSMUST00000183699 94 ntBASIC13.12□□□□□ -0.31
Lnp1A0A1B0GSK3 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lnp1A0A1B0GSK3 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lnp1A0A1B0GSK3 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lnp1A0A1B0GSK3 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lnp1A0A1B0GSK3 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lnp1A0A1B0GSK3 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lnp1A0A1B0GSK3 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Lnp1A0A1B0GSK3 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Lnp1A0A1B0GSK3 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lnp1A0A1B0GSK3 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC13.12□□□□□ -0.31
Lnp1A0A1B0GSK3 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lnp1A0A1B0GSK3 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lnp1A0A1B0GSK3 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Lnp1A0A1B0GSK3 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lnp1A0A1B0GSK3 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lnp1A0A1B0GSK3 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Lnp1A0A1B0GSK3 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Lnp1A0A1B0GSK3 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Lnp1A0A1B0GSK3 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Lnp1A0A1B0GSK3 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lnp1A0A1B0GSK3 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Lnp1A0A1B0GSK3 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Lnp1A0A1B0GSK3 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lnp1A0A1B0GSK3 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lnp1A0A1B0GSK3 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lnp1A0A1B0GSK3 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lnp1A0A1B0GSK3 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC13.11□□□□□ -0.31
Lnp1A0A1B0GSK3 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC13.11□□□□□ -0.31
Lnp1A0A1B0GSK3 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lnp1A0A1B0GSK3 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Lnp1A0A1B0GSK3 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC13.11□□□□□ -0.31
Lnp1A0A1B0GSK3 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lnp1A0A1B0GSK3 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lnp1A0A1B0GSK3 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lnp1A0A1B0GSK3 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lnp1A0A1B0GSK3 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC13.11□□□□□ -0.31
Lnp1A0A1B0GSK3 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Lnp1A0A1B0GSK3 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Lnp1A0A1B0GSK3 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lnp1A0A1B0GSK3 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lnp1A0A1B0GSK3 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lnp1A0A1B0GSK3 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC13.11□□□□□ -0.31
Lnp1A0A1B0GSK3 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Lnp1A0A1B0GSK3 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Lnp1A0A1B0GSK3 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lnp1A0A1B0GSK3 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Lnp1A0A1B0GSK3 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lnp1A0A1B0GSK3 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Lnp1A0A1B0GSK3 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lnp1A0A1B0GSK3 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lnp1A0A1B0GSK3 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lnp1A0A1B0GSK3 Ccdc166-201ENSMUST00000182172 2584 ntBASIC13.1□□□□□ -0.31
Lnp1A0A1B0GSK3 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Lnp1A0A1B0GSK3 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lnp1A0A1B0GSK3 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lnp1A0A1B0GSK3 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lnp1A0A1B0GSK3 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC13.1□□□□□ -0.31
Lnp1A0A1B0GSK3 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC13.1□□□□□ -0.31
Lnp1A0A1B0GSK3 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC13.1□□□□□ -0.31
Lnp1A0A1B0GSK3 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC13.1□□□□□ -0.31
Lnp1A0A1B0GSK3 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC13.1□□□□□ -0.31
Lnp1A0A1B0GSK3 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC13.1□□□□□ -0.31
Lnp1A0A1B0GSK3 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC13.1□□□□□ -0.31
Lnp1A0A1B0GSK3 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lnp1A0A1B0GSK3 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Lnp1A0A1B0GSK3 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Lnp1A0A1B0GSK3 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lnp1A0A1B0GSK3 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lnp1A0A1B0GSK3 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lnp1A0A1B0GSK3 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lnp1A0A1B0GSK3 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lnp1A0A1B0GSK3 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
Lnp1A0A1B0GSK3 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Lnp1A0A1B0GSK3 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lnp1A0A1B0GSK3 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Lnp1A0A1B0GSK3 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lnp1A0A1B0GSK3 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Lnp1A0A1B0GSK3 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Lnp1A0A1B0GSK3 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
Lnp1A0A1B0GSK3 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lnp1A0A1B0GSK3 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Lnp1A0A1B0GSK3 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Lnp1A0A1B0GSK3 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC13.09□□□□□ -0.31
Lnp1A0A1B0GSK3 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms