Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv17A0A140T8P8 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC12.09□□□□□ -0.47
Trbv17A0A140T8P8 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv17A0A140T8P8 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv17A0A140T8P8 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv17A0A140T8P8 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv17A0A140T8P8 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC12.09□□□□□ -0.47
Trbv17A0A140T8P8 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv17A0A140T8P8 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trbv17A0A140T8P8 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Trbv17A0A140T8P8 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv17A0A140T8P8 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv17A0A140T8P8 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv17A0A140T8P8 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv17A0A140T8P8 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trbv17A0A140T8P8 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
Trbv17A0A140T8P8 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC12.09□□□□□ -0.47
Trbv17A0A140T8P8 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv17A0A140T8P8 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv17A0A140T8P8 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv17A0A140T8P8 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC12.09□□□□□ -0.47
Trbv17A0A140T8P8 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv17A0A140T8P8 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv17A0A140T8P8 AC114585.2-202ENSMUST00000228094 426 ntBASIC12.09□□□□□ -0.47
Trbv17A0A140T8P8 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv17A0A140T8P8 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv17A0A140T8P8 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv17A0A140T8P8 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv17A0A140T8P8 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv17A0A140T8P8 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv17A0A140T8P8 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trbv17A0A140T8P8 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv17A0A140T8P8 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv17A0A140T8P8 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv17A0A140T8P8 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Trbv17A0A140T8P8 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv17A0A140T8P8 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC12.08□□□□□ -0.48
Trbv17A0A140T8P8 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv17A0A140T8P8 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv17A0A140T8P8 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv17A0A140T8P8 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv17A0A140T8P8 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
Trbv17A0A140T8P8 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC12.08□□□□□ -0.48
Trbv17A0A140T8P8 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv17A0A140T8P8 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv17A0A140T8P8 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv17A0A140T8P8 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv17A0A140T8P8 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv17A0A140T8P8 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv17A0A140T8P8 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Trbv17A0A140T8P8 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC12.08□□□□□ -0.48
Trbv17A0A140T8P8 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv17A0A140T8P8 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv17A0A140T8P8 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv17A0A140T8P8 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv17A0A140T8P8 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Trbv17A0A140T8P8 Gm27742-201ENSMUST00000184667 60 ntBASIC12.08□□□□□ -0.48
Trbv17A0A140T8P8 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC12.08□□□□□ -0.48
Trbv17A0A140T8P8 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv17A0A140T8P8 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Trbv17A0A140T8P8 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv17A0A140T8P8 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv17A0A140T8P8 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trbv17A0A140T8P8 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv17A0A140T8P8 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv17A0A140T8P8 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv17A0A140T8P8 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Trbv17A0A140T8P8 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv17A0A140T8P8 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv17A0A140T8P8 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC12.08□□□□□ -0.48
Trbv17A0A140T8P8 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv17A0A140T8P8 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv17A0A140T8P8 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv17A0A140T8P8 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trbv17A0A140T8P8 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv17A0A140T8P8 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv17A0A140T8P8 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv17A0A140T8P8 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC12.07□□□□□ -0.48
Trbv17A0A140T8P8 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv17A0A140T8P8 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv17A0A140T8P8 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv17A0A140T8P8 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv17A0A140T8P8 AC069562.2-201ENSMUST00000224644 2146 ntBASIC12.07□□□□□ -0.48
Trbv17A0A140T8P8 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv17A0A140T8P8 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv17A0A140T8P8 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv17A0A140T8P8 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv17A0A140T8P8 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv17A0A140T8P8 Gm32996-201ENSMUST00000199828 1447 ntBASIC12.07□□□□□ -0.48
Trbv17A0A140T8P8 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC12.07□□□□□ -0.48
Trbv17A0A140T8P8 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv17A0A140T8P8 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv17A0A140T8P8 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv17A0A140T8P8 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv17A0A140T8P8 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC12.07□□□□□ -0.48
Trbv17A0A140T8P8 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv17A0A140T8P8 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv17A0A140T8P8 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv17A0A140T8P8 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv17A0A140T8P8 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms