Protein–RNA interactions for Protein: A0A140LIW3

Frmpd3, FERM and PDZ domain-containing 3, mousemouse

Predictions only

Length 1,774 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Frmpd3A0A140LIW3 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Frmpd3A0A140LIW3 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Frmpd3A0A140LIW3 Gm8839-201ENSMUST00000121279 1645 ntBASIC18.55■□□□□ 0.56
Frmpd3A0A140LIW3 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Frmpd3A0A140LIW3 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Frmpd3A0A140LIW3 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Frmpd3A0A140LIW3 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Frmpd3A0A140LIW3 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Frmpd3A0A140LIW3 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Frmpd3A0A140LIW3 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Frmpd3A0A140LIW3 Gm11543-201ENSMUST00000120758 370 ntBASIC18.55■□□□□ 0.56
Frmpd3A0A140LIW3 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Frmpd3A0A140LIW3 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Frmpd3A0A140LIW3 Gm27533-201ENSMUST00000183800 152 ntBASIC18.55■□□□□ 0.56
Frmpd3A0A140LIW3 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Frmpd3A0A140LIW3 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Frmpd3A0A140LIW3 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Frmpd3A0A140LIW3 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC18.55■□□□□ 0.56
Frmpd3A0A140LIW3 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Frmpd3A0A140LIW3 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Frmpd3A0A140LIW3 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Frmpd3A0A140LIW3 Rbfox2-206ENSMUST00000227314 1810 ntBASIC18.54■□□□□ 0.56
Frmpd3A0A140LIW3 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Frmpd3A0A140LIW3 AC124751.1-201ENSMUST00000222716 1408 ntBASIC18.54■□□□□ 0.56
Frmpd3A0A140LIW3 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Frmpd3A0A140LIW3 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Frmpd3A0A140LIW3 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Frmpd3A0A140LIW3 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Frmpd3A0A140LIW3 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC18.54■□□□□ 0.56
Frmpd3A0A140LIW3 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Frmpd3A0A140LIW3 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC18.54■□□□□ 0.56
Frmpd3A0A140LIW3 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC18.54■□□□□ 0.56
Frmpd3A0A140LIW3 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Frmpd3A0A140LIW3 Gm25857-201ENSMUST00000082788 129 ntBASIC18.54■□□□□ 0.56
Frmpd3A0A140LIW3 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Frmpd3A0A140LIW3 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Frmpd3A0A140LIW3 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Frmpd3A0A140LIW3 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Frmpd3A0A140LIW3 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Frmpd3A0A140LIW3 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Frmpd3A0A140LIW3 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC18.53■□□□□ 0.56
Frmpd3A0A140LIW3 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Frmpd3A0A140LIW3 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Frmpd3A0A140LIW3 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Frmpd3A0A140LIW3 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Frmpd3A0A140LIW3 AL593843.1-201ENSMUST00000195891 145 ntBASIC18.53■□□□□ 0.56
Frmpd3A0A140LIW3 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Frmpd3A0A140LIW3 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Frmpd3A0A140LIW3 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Frmpd3A0A140LIW3 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Frmpd3A0A140LIW3 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Frmpd3A0A140LIW3 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Frmpd3A0A140LIW3 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Frmpd3A0A140LIW3 Gm22189-201ENSMUST00000103822 86 ntBASIC18.53■□□□□ 0.56
Frmpd3A0A140LIW3 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Frmpd3A0A140LIW3 Gm12138-201ENSMUST00000122180 951 ntBASIC18.53■□□□□ 0.56
Frmpd3A0A140LIW3 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Frmpd3A0A140LIW3 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Frmpd3A0A140LIW3 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Frmpd3A0A140LIW3 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC18.53■□□□□ 0.56
Frmpd3A0A140LIW3 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC18.52■□□□□ 0.56
Frmpd3A0A140LIW3 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Frmpd3A0A140LIW3 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Frmpd3A0A140LIW3 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Frmpd3A0A140LIW3 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Frmpd3A0A140LIW3 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
Frmpd3A0A140LIW3 Gm8116-201ENSMUST00000182917 1201 ntBASIC18.52■□□□□ 0.55
Frmpd3A0A140LIW3 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC18.52■□□□□ 0.55
Frmpd3A0A140LIW3 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Frmpd3A0A140LIW3 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC18.52■□□□□ 0.55
Frmpd3A0A140LIW3 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Frmpd3A0A140LIW3 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Frmpd3A0A140LIW3 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Frmpd3A0A140LIW3 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Frmpd3A0A140LIW3 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC18.51■□□□□ 0.55
Frmpd3A0A140LIW3 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Frmpd3A0A140LIW3 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC18.51■□□□□ 0.55
Frmpd3A0A140LIW3 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Frmpd3A0A140LIW3 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Frmpd3A0A140LIW3 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Frmpd3A0A140LIW3 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Frmpd3A0A140LIW3 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Frmpd3A0A140LIW3 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Frmpd3A0A140LIW3 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Frmpd3A0A140LIW3 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Frmpd3A0A140LIW3 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Frmpd3A0A140LIW3 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Frmpd3A0A140LIW3 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Frmpd3A0A140LIW3 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Frmpd3A0A140LIW3 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC18.5■□□□□ 0.55
Frmpd3A0A140LIW3 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC18.5■□□□□ 0.55
Frmpd3A0A140LIW3 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC18.5■□□□□ 0.55
Frmpd3A0A140LIW3 Gm15483-201ENSMUST00000120338 456 ntBASIC18.5■□□□□ 0.55
Frmpd3A0A140LIW3 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Frmpd3A0A140LIW3 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC18.5■□□□□ 0.55
Frmpd3A0A140LIW3 Gm16026-204ENSMUST00000162652 683 ntBASIC18.5■□□□□ 0.55
Frmpd3A0A140LIW3 Gm18187-201ENSMUST00000196476 984 ntBASIC18.5■□□□□ 0.55
Frmpd3A0A140LIW3 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Frmpd3A0A140LIW3 Gm44344-201ENSMUST00000200287 129 ntBASIC18.5■□□□□ 0.55
Frmpd3A0A140LIW3 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms