Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav9d-4A0A0G2JG37 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav9d-4A0A0G2JG37 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav9d-4A0A0G2JG37 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav9d-4A0A0G2JG37 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC10.82□□□□□ -0.68
Trav9d-4A0A0G2JG37 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav9d-4A0A0G2JG37 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav9d-4A0A0G2JG37 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav9d-4A0A0G2JG37 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav9d-4A0A0G2JG37 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Trav9d-4A0A0G2JG37 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav9d-4A0A0G2JG37 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav9d-4A0A0G2JG37 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav9d-4A0A0G2JG37 AC163637.1-201ENSMUST00000215491 1894 ntBASIC10.81□□□□□ -0.68
Trav9d-4A0A0G2JG37 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Trav9d-4A0A0G2JG37 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav9d-4A0A0G2JG37 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC10.81□□□□□ -0.68
Trav9d-4A0A0G2JG37 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav9d-4A0A0G2JG37 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC10.81□□□□□ -0.68
Trav9d-4A0A0G2JG37 Gm5297-201ENSMUST00000198555 1171 ntBASIC10.81□□□□□ -0.68
Trav9d-4A0A0G2JG37 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC10.81□□□□□ -0.68
Trav9d-4A0A0G2JG37 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC10.81□□□□□ -0.68
Trav9d-4A0A0G2JG37 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav9d-4A0A0G2JG37 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav9d-4A0A0G2JG37 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav9d-4A0A0G2JG37 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav9d-4A0A0G2JG37 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav9d-4A0A0G2JG37 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Trav9d-4A0A0G2JG37 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav9d-4A0A0G2JG37 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav9d-4A0A0G2JG37 Ap5m1-205ENSMUST00000227431 3757 ntBASIC10.8□□□□□ -0.68
Trav9d-4A0A0G2JG37 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav9d-4A0A0G2JG37 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav9d-4A0A0G2JG37 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav9d-4A0A0G2JG37 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav9d-4A0A0G2JG37 Gm6190-201ENSMUST00000220683 1374 ntBASIC10.8□□□□□ -0.68
Trav9d-4A0A0G2JG37 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav9d-4A0A0G2JG37 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav9d-4A0A0G2JG37 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav9d-4A0A0G2JG37 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC10.8□□□□□ -0.68
Trav9d-4A0A0G2JG37 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Trav9d-4A0A0G2JG37 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav9d-4A0A0G2JG37 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav9d-4A0A0G2JG37 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav9d-4A0A0G2JG37 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav9d-4A0A0G2JG37 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav9d-4A0A0G2JG37 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav9d-4A0A0G2JG37 Gm37856-201ENSMUST00000191634 999 ntBASIC10.8□□□□□ -0.68
Trav9d-4A0A0G2JG37 Gm44878-201ENSMUST00000205812 1295 ntBASIC10.8□□□□□ -0.68
Trav9d-4A0A0G2JG37 AC135637.1-201ENSMUST00000227750 365 ntBASIC10.8□□□□□ -0.68
Trav9d-4A0A0G2JG37 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav9d-4A0A0G2JG37 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav9d-4A0A0G2JG37 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav9d-4A0A0G2JG37 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC10.8□□□□□ -0.68
Trav9d-4A0A0G2JG37 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav9d-4A0A0G2JG37 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC10.8□□□□□ -0.68
Trav9d-4A0A0G2JG37 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Trav9d-4A0A0G2JG37 Gm27528-202ENSMUST00000222916 2012 ntBASIC10.8□□□□□ -0.68
Trav9d-4A0A0G2JG37 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav9d-4A0A0G2JG37 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Trav9d-4A0A0G2JG37 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Trav9d-4A0A0G2JG37 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC10.8□□□□□ -0.68
Trav9d-4A0A0G2JG37 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav9d-4A0A0G2JG37 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC10.8□□□□□ -0.68
Trav9d-4A0A0G2JG37 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Trav9d-4A0A0G2JG37 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav9d-4A0A0G2JG37 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC10.79□□□□□ -0.68
Trav9d-4A0A0G2JG37 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav9d-4A0A0G2JG37 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC10.79□□□□□ -0.68
Trav9d-4A0A0G2JG37 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav9d-4A0A0G2JG37 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Trav9d-4A0A0G2JG37 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav9d-4A0A0G2JG37 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC10.79□□□□□ -0.68
Trav9d-4A0A0G2JG37 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav9d-4A0A0G2JG37 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav9d-4A0A0G2JG37 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC10.79□□□□□ -0.68
Trav9d-4A0A0G2JG37 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav9d-4A0A0G2JG37 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav9d-4A0A0G2JG37 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC10.79□□□□□ -0.68
Trav9d-4A0A0G2JG37 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav9d-4A0A0G2JG37 Gm14464-201ENSMUST00000119658 1254 ntBASIC10.79□□□□□ -0.68
Trav9d-4A0A0G2JG37 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav9d-4A0A0G2JG37 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav9d-4A0A0G2JG37 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav9d-4A0A0G2JG37 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC10.79□□□□□ -0.68
Trav9d-4A0A0G2JG37 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Trav9d-4A0A0G2JG37 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC10.79□□□□□ -0.68
Trav9d-4A0A0G2JG37 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav9d-4A0A0G2JG37 Gm44729-201ENSMUST00000206759 2052 ntBASIC10.79□□□□□ -0.68
Trav9d-4A0A0G2JG37 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav9d-4A0A0G2JG37 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav9d-4A0A0G2JG37 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav9d-4A0A0G2JG37 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav9d-4A0A0G2JG37 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav9d-4A0A0G2JG37 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC10.79□□□□□ -0.68
Trav9d-4A0A0G2JG37 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav9d-4A0A0G2JG37 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Trav9d-4A0A0G2JG37 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav9d-4A0A0G2JG37 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav9d-4A0A0G2JG37 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms