Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC12.8□□□□□ -0.36
Trav13n-4A0A0G2JG01 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13n-4A0A0G2JG01 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13n-4A0A0G2JG01 Gm42901-201ENSMUST00000197735 3171 ntBASIC12.8□□□□□ -0.36
Trav13n-4A0A0G2JG01 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13n-4A0A0G2JG01 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Trav13n-4A0A0G2JG01 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13n-4A0A0G2JG01 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13n-4A0A0G2JG01 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13n-4A0A0G2JG01 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13n-4A0A0G2JG01 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13n-4A0A0G2JG01 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13n-4A0A0G2JG01 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13n-4A0A0G2JG01 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13n-4A0A0G2JG01 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13n-4A0A0G2JG01 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13n-4A0A0G2JG01 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trav13n-4A0A0G2JG01 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13n-4A0A0G2JG01 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13n-4A0A0G2JG01 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trav13n-4A0A0G2JG01 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13n-4A0A0G2JG01 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC12.79□□□□□ -0.36
Trav13n-4A0A0G2JG01 Gm15794-201ENSMUST00000120182 631 ntBASIC12.79□□□□□ -0.36
Trav13n-4A0A0G2JG01 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC12.79□□□□□ -0.36
Trav13n-4A0A0G2JG01 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13n-4A0A0G2JG01 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trav13n-4A0A0G2JG01 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13n-4A0A0G2JG01 Gm43514-201ENSMUST00000198852 424 ntBASIC12.79□□□□□ -0.36
Trav13n-4A0A0G2JG01 Gm6443-201ENSMUST00000203599 874 ntBASIC12.79□□□□□ -0.36
Trav13n-4A0A0G2JG01 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13n-4A0A0G2JG01 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13n-4A0A0G2JG01 Birc2-201ENSMUST00000054878 378 ntBASIC12.79□□□□□ -0.36
Trav13n-4A0A0G2JG01 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Trav13n-4A0A0G2JG01 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC12.79□□□□□ -0.36
Trav13n-4A0A0G2JG01 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13n-4A0A0G2JG01 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13n-4A0A0G2JG01 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13n-4A0A0G2JG01 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13n-4A0A0G2JG01 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13n-4A0A0G2JG01 Gm6190-201ENSMUST00000220683 1374 ntBASIC12.79□□□□□ -0.36
Trav13n-4A0A0G2JG01 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13n-4A0A0G2JG01 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13n-4A0A0G2JG01 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC12.79□□□□□ -0.36
Trav13n-4A0A0G2JG01 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13n-4A0A0G2JG01 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13n-4A0A0G2JG01 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC12.79□□□□□ -0.36
Trav13n-4A0A0G2JG01 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13n-4A0A0G2JG01 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13n-4A0A0G2JG01 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13n-4A0A0G2JG01 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trav13n-4A0A0G2JG01 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13n-4A0A0G2JG01 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13n-4A0A0G2JG01 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13n-4A0A0G2JG01 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13n-4A0A0G2JG01 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Trav13n-4A0A0G2JG01 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC12.78□□□□□ -0.36
Trav13n-4A0A0G2JG01 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13n-4A0A0G2JG01 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13n-4A0A0G2JG01 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13n-4A0A0G2JG01 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13n-4A0A0G2JG01 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Trav13n-4A0A0G2JG01 App-207ENSMUST00000227737 2827 ntBASIC12.78□□□□□ -0.36
Trav13n-4A0A0G2JG01 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13n-4A0A0G2JG01 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13n-4A0A0G2JG01 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13n-4A0A0G2JG01 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav13n-4A0A0G2JG01 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav13n-4A0A0G2JG01 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13n-4A0A0G2JG01 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13n-4A0A0G2JG01 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trav13n-4A0A0G2JG01 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Trav13n-4A0A0G2JG01 Gm13884-201ENSMUST00000118103 829 ntBASIC12.78□□□□□ -0.36
Trav13n-4A0A0G2JG01 Gm12895-201ENSMUST00000122214 226 ntBASIC12.78□□□□□ -0.36
Trav13n-4A0A0G2JG01 Gm10052-201ENSMUST00000168019 960 ntBASIC12.78□□□□□ -0.36
Trav13n-4A0A0G2JG01 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav13n-4A0A0G2JG01 Gm7729-201ENSMUST00000050143 801 ntBASIC12.78□□□□□ -0.36
Trav13n-4A0A0G2JG01 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13n-4A0A0G2JG01 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Trav13n-4A0A0G2JG01 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13n-4A0A0G2JG01 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13n-4A0A0G2JG01 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Trav13n-4A0A0G2JG01 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Trav13n-4A0A0G2JG01 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13n-4A0A0G2JG01 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13n-4A0A0G2JG01 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Trav13n-4A0A0G2JG01 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13n-4A0A0G2JG01 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13n-4A0A0G2JG01 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC12.78□□□□□ -0.36
Trav13n-4A0A0G2JG01 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13n-4A0A0G2JG01 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Trav13n-4A0A0G2JG01 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Trav13n-4A0A0G2JG01 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13n-4A0A0G2JG01 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13n-4A0A0G2JG01 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13n-4A0A0G2JG01 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav13n-4A0A0G2JG01 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trav13n-4A0A0G2JG01 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trav13n-4A0A0G2JG01 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav13n-4A0A0G2JG01 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav13n-4A0A0G2JG01 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms