Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC11.44□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC11.44□□□□□ -0.58
Trav13n-1A0A0G2JEU8 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC11.44□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Gm44454-201ENSMUST00000198541 138 ntBASIC11.44□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Gm5864-201ENSMUST00000202263 970 ntBASIC11.44□□□□□ -0.58
Trav13n-1A0A0G2JEU8 AC159301.1-201ENSMUST00000225130 1182 ntBASIC11.44□□□□□ -0.58
Trav13n-1A0A0G2JEU8 AC114585.2-202ENSMUST00000228094 426 ntBASIC11.44□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav13n-1A0A0G2JEU8 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC11.44□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Sybu-209ENSMUST00000228639 4113 ntBASIC11.43□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC11.43□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC11.43□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC11.43□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Gm27867-201ENSMUST00000184778 125 ntBASIC11.43□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC11.43□□□□□ -0.58
Trav13n-1A0A0G2JEU8 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC11.43□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC11.43□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC11.42□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Slc35b2-202ENSMUST00000223987 1766 ntBASIC11.42□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC11.42□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC11.42□□□□□ -0.58
Trav13n-1A0A0G2JEU8 CT009713.7-201ENSMUST00000224689 571 ntBASIC11.42□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC11.41□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13n-1A0A0G2JEU8 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC11.41□□□□□ -0.58
Trav13n-1A0A0G2JEU8 Gm13884-201ENSMUST00000118103 829 ntBASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms