Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC11.49□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Rbfox2-206ENSMUST00000227314 1810 ntBASIC11.49□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC11.48□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC11.48□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC11.48□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC11.48□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC11.48□□□□□ -0.57
Trav9n-2A0A0G2JDP3 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
Trav9n-2A0A0G2JDP3 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC11.48□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Gm44729-201ENSMUST00000206759 2052 ntBASIC11.48□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Gm42473-201ENSMUST00000201056 2291 ntBASIC11.48□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC11.48□□□□□ -0.57
Trav9n-2A0A0G2JDP3 App-207ENSMUST00000227737 2827 ntBASIC11.48□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9n-2A0A0G2JDP3 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC11.47□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC11.47□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC11.47□□□□□ -0.57
Trav9n-2A0A0G2JDP3 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Wnt10b-206ENSMUST00000228546 2709 ntBASIC11.46□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC11.46□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Ighv6-1-201ENSMUST00000193612 343 ntBASIC11.46□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav9n-2A0A0G2JDP3 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav9n-2A0A0G2JDP3 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms