Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC14.48□□□□□ -0.09
Trbc1A0A0A6YWV4 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbc1A0A0A6YWV4 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbc1A0A0A6YWV4 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbc1A0A0A6YWV4 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbc1A0A0A6YWV4 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbc1A0A0A6YWV4 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbc1A0A0A6YWV4 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbc1A0A0A6YWV4 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trbc1A0A0A6YWV4 Gm24589-201ENSMUST00000116692 94 ntBASIC14.48□□□□□ -0.09
Trbc1A0A0A6YWV4 Gm12644-201ENSMUST00000119935 606 ntBASIC14.48□□□□□ -0.09
Trbc1A0A0A6YWV4 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC14.48□□□□□ -0.09
Trbc1A0A0A6YWV4 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.48□□□□□ -0.09
Trbc1A0A0A6YWV4 Birc2-201ENSMUST00000054878 378 ntBASIC14.48□□□□□ -0.09
Trbc1A0A0A6YWV4 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbc1A0A0A6YWV4 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trbc1A0A0A6YWV4 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbc1A0A0A6YWV4 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbc1A0A0A6YWV4 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbc1A0A0A6YWV4 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trbc1A0A0A6YWV4 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbc1A0A0A6YWV4 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trbc1A0A0A6YWV4 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbc1A0A0A6YWV4 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbc1A0A0A6YWV4 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbc1A0A0A6YWV4 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbc1A0A0A6YWV4 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trbc1A0A0A6YWV4 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.48□□□□□ -0.09
Trbc1A0A0A6YWV4 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trbc1A0A0A6YWV4 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trbc1A0A0A6YWV4 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trbc1A0A0A6YWV4 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trbc1A0A0A6YWV4 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbc1A0A0A6YWV4 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Trbc1A0A0A6YWV4 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trbc1A0A0A6YWV4 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Trbc1A0A0A6YWV4 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbc1A0A0A6YWV4 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trbc1A0A0A6YWV4 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Trbc1A0A0A6YWV4 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbc1A0A0A6YWV4 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbc1A0A0A6YWV4 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbc1A0A0A6YWV4 Mir6404-201ENSMUST00000183699 94 ntBASIC14.47□□□□□ -0.09
Trbc1A0A0A6YWV4 Gm27867-201ENSMUST00000184778 125 ntBASIC14.47□□□□□ -0.09
Trbc1A0A0A6YWV4 Gm34391-201ENSMUST00000203706 907 ntBASIC14.47□□□□□ -0.09
Trbc1A0A0A6YWV4 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
Trbc1A0A0A6YWV4 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbc1A0A0A6YWV4 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbc1A0A0A6YWV4 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trbc1A0A0A6YWV4 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbc1A0A0A6YWV4 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbc1A0A0A6YWV4 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbc1A0A0A6YWV4 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Trbc1A0A0A6YWV4 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbc1A0A0A6YWV4 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbc1A0A0A6YWV4 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbc1A0A0A6YWV4 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Trbc1A0A0A6YWV4 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbc1A0A0A6YWV4 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trbc1A0A0A6YWV4 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trbc1A0A0A6YWV4 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trbc1A0A0A6YWV4 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
Trbc1A0A0A6YWV4 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC14.46□□□□□ -0.09
Trbc1A0A0A6YWV4 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trbc1A0A0A6YWV4 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trbc1A0A0A6YWV4 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trbc1A0A0A6YWV4 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trbc1A0A0A6YWV4 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC14.46□□□□□ -0.09
Trbc1A0A0A6YWV4 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trbc1A0A0A6YWV4 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC14.46□□□□□ -0.09
Trbc1A0A0A6YWV4 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
Trbc1A0A0A6YWV4 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC14.46□□□□□ -0.09
Trbc1A0A0A6YWV4 Gm27741-201ENSMUST00000185060 237 ntBASIC14.46□□□□□ -0.09
Trbc1A0A0A6YWV4 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC14.46□□□□□ -0.09
Trbc1A0A0A6YWV4 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trbc1A0A0A6YWV4 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trbc1A0A0A6YWV4 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Trbc1A0A0A6YWV4 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trbc1A0A0A6YWV4 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trbc1A0A0A6YWV4 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
Trbc1A0A0A6YWV4 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trbc1A0A0A6YWV4 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.46□□□□□ -0.1
Trbc1A0A0A6YWV4 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trbc1A0A0A6YWV4 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trbc1A0A0A6YWV4 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Trbc1A0A0A6YWV4 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.1
Trbc1A0A0A6YWV4 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Trbc1A0A0A6YWV4 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trbc1A0A0A6YWV4 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC14.46□□□□□ -0.1
Trbc1A0A0A6YWV4 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trbc1A0A0A6YWV4 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbc1A0A0A6YWV4 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbc1A0A0A6YWV4 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbc1A0A0A6YWV4 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Trbc1A0A0A6YWV4 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbc1A0A0A6YWV4 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbc1A0A0A6YWV4 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trbc1A0A0A6YWV4 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbc1A0A0A6YWV4 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.45□□□□□ -0.1
Trbc1A0A0A6YWV4 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 97.2 ms