Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-4A0A075B6B4 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trav6-4A0A075B6B4 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-4A0A075B6B4 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-4A0A075B6B4 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-4A0A075B6B4 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-4A0A075B6B4 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-4A0A075B6B4 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-4A0A075B6B4 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trav6-4A0A075B6B4 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trav6-4A0A075B6B4 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav6-4A0A075B6B4 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-4A0A075B6B4 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-4A0A075B6B4 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-4A0A075B6B4 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-4A0A075B6B4 Ntrk2-205ENSMUST00000224402 2284 ntBASIC12.13□□□□□ -0.47
Trav6-4A0A075B6B4 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trav6-4A0A075B6B4 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
Trav6-4A0A075B6B4 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Trav6-4A0A075B6B4 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-4A0A075B6B4 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Trav6-4A0A075B6B4 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-4A0A075B6B4 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-4A0A075B6B4 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-4A0A075B6B4 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-4A0A075B6B4 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-4A0A075B6B4 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-4A0A075B6B4 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-4A0A075B6B4 Gm12644-201ENSMUST00000119935 606 ntBASIC12.13□□□□□ -0.47
Trav6-4A0A075B6B4 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-4A0A075B6B4 Gm28033-201ENSMUST00000184224 96 ntBASIC12.13□□□□□ -0.47
Trav6-4A0A075B6B4 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-4A0A075B6B4 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC12.13□□□□□ -0.47
Trav6-4A0A075B6B4 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC12.13□□□□□ -0.47
Trav6-4A0A075B6B4 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC12.13□□□□□ -0.47
Trav6-4A0A075B6B4 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Trav6-4A0A075B6B4 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-4A0A075B6B4 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-4A0A075B6B4 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-4A0A075B6B4 Gm44729-201ENSMUST00000206759 2052 ntBASIC12.13□□□□□ -0.47
Trav6-4A0A075B6B4 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-4A0A075B6B4 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-4A0A075B6B4 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-4A0A075B6B4 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-4A0A075B6B4 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-4A0A075B6B4 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-4A0A075B6B4 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-4A0A075B6B4 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-4A0A075B6B4 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-4A0A075B6B4 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-4A0A075B6B4 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-4A0A075B6B4 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-4A0A075B6B4 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-4A0A075B6B4 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-4A0A075B6B4 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Trav6-4A0A075B6B4 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-4A0A075B6B4 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-4A0A075B6B4 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-4A0A075B6B4 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-4A0A075B6B4 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
Trav6-4A0A075B6B4 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC12.12□□□□□ -0.47
Trav6-4A0A075B6B4 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC12.12□□□□□ -0.47
Trav6-4A0A075B6B4 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC12.12□□□□□ -0.47
Trav6-4A0A075B6B4 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-4A0A075B6B4 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC12.12□□□□□ -0.47
Trav6-4A0A075B6B4 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC12.12□□□□□ -0.47
Trav6-4A0A075B6B4 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Trav6-4A0A075B6B4 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-4A0A075B6B4 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-4A0A075B6B4 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-4A0A075B6B4 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-4A0A075B6B4 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Trav6-4A0A075B6B4 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Trav6-4A0A075B6B4 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-4A0A075B6B4 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-4A0A075B6B4 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-4A0A075B6B4 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-4A0A075B6B4 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-4A0A075B6B4 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-4A0A075B6B4 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC12.11□□□□□ -0.47
Trav6-4A0A075B6B4 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-4A0A075B6B4 Gm19430-201ENSMUST00000193847 2137 ntBASIC12.11□□□□□ -0.47
Trav6-4A0A075B6B4 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-4A0A075B6B4 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-4A0A075B6B4 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-4A0A075B6B4 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-4A0A075B6B4 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-4A0A075B6B4 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-4A0A075B6B4 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-4A0A075B6B4 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-4A0A075B6B4 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-4A0A075B6B4 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-4A0A075B6B4 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-4A0A075B6B4 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-4A0A075B6B4 Gm4609-201ENSMUST00000106443 1002 ntBASIC12.11□□□□□ -0.47
Trav6-4A0A075B6B4 Gm5138-201ENSMUST00000113842 1002 ntBASIC12.11□□□□□ -0.47
Trav6-4A0A075B6B4 Gm15191-201ENSMUST00000117933 1000 ntBASIC12.11□□□□□ -0.47
Trav6-4A0A075B6B4 Gm12182-201ENSMUST00000118655 1008 ntBASIC12.11□□□□□ -0.47
Trav6-4A0A075B6B4 Gm13882-201ENSMUST00000120886 1002 ntBASIC12.11□□□□□ -0.47
Trav6-4A0A075B6B4 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms