Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Trav17A0A075B655 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trav17A0A075B655 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav17A0A075B655 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trav17A0A075B655 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav17A0A075B655 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav17A0A075B655 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC12.54□□□□□ -0.4
Trav17A0A075B655 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav17A0A075B655 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav17A0A075B655 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav17A0A075B655 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav17A0A075B655 Gm38058-201ENSMUST00000194323 4368 ntBASIC12.54□□□□□ -0.4
Trav17A0A075B655 Gm13168-201ENSMUST00000121771 632 ntBASIC12.54□□□□□ -0.4
Trav17A0A075B655 Gm13474-201ENSMUST00000122466 815 ntBASIC12.54□□□□□ -0.4
Trav17A0A075B655 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC12.54□□□□□ -0.4
Trav17A0A075B655 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav17A0A075B655 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Trav17A0A075B655 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav17A0A075B655 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav17A0A075B655 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav17A0A075B655 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav17A0A075B655 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav17A0A075B655 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav17A0A075B655 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav17A0A075B655 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav17A0A075B655 Tfap2a-203ENSMUST00000223869 2037 ntBASIC12.54□□□□□ -0.4
Trav17A0A075B655 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav17A0A075B655 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav17A0A075B655 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Trav17A0A075B655 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav17A0A075B655 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav17A0A075B655 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav17A0A075B655 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav17A0A075B655 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav17A0A075B655 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC12.53□□□□□ -0.4
Trav17A0A075B655 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trav17A0A075B655 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav17A0A075B655 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav17A0A075B655 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav17A0A075B655 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav17A0A075B655 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC12.53□□□□□ -0.4
Trav17A0A075B655 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav17A0A075B655 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav17A0A075B655 Gm16061-201ENSMUST00000122167 857 ntBASIC12.53□□□□□ -0.4
Trav17A0A075B655 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav17A0A075B655 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC12.53□□□□□ -0.4
Trav17A0A075B655 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav17A0A075B655 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav17A0A075B655 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav17A0A075B655 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav17A0A075B655 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav17A0A075B655 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav17A0A075B655 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav17A0A075B655 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC12.53□□□□□ -0.4
Trav17A0A075B655 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC12.53□□□□□ -0.4
Trav17A0A075B655 Spsb2-203ENSMUST00000112473 1322 ntBASIC12.53□□□□□ -0.4
Trav17A0A075B655 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav17A0A075B655 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav17A0A075B655 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trav17A0A075B655 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav17A0A075B655 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav17A0A075B655 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav17A0A075B655 Gm10584-201ENSMUST00000207036 2628 ntBASIC12.53□□□□□ -0.4
Trav17A0A075B655 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav17A0A075B655 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav17A0A075B655 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav17A0A075B655 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC12.53□□□□□ -0.4
Trav17A0A075B655 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trav17A0A075B655 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav17A0A075B655 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav17A0A075B655 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Trav17A0A075B655 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav17A0A075B655 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav17A0A075B655 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trav17A0A075B655 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav17A0A075B655 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Trav17A0A075B655 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav17A0A075B655 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav17A0A075B655 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav17A0A075B655 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav17A0A075B655 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav17A0A075B655 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav17A0A075B655 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav17A0A075B655 Gm10653-202ENSMUST00000139570 835 ntBASIC12.52□□□□□ -0.41
Trav17A0A075B655 AC135963.1-201ENSMUST00000211640 717 ntBASIC12.52□□□□□ -0.41
Trav17A0A075B655 Gm7213-201ENSMUST00000215977 950 ntBASIC12.52□□□□□ -0.41
Trav17A0A075B655 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav17A0A075B655 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav17A0A075B655 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav17A0A075B655 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav17A0A075B655 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Trav17A0A075B655 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav17A0A075B655 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Trav17A0A075B655 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav17A0A075B655 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav17A0A075B655 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav17A0A075B655 Gm6858-201ENSMUST00000208582 1468 ntBASIC12.52□□□□□ -0.41
Trav17A0A075B655 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav17A0A075B655 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav17A0A075B655 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 85.2 ms