Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Zfp264-201ENSMUST00000208656 1563 ntBASIC12.21□□□□□ -0.46
Trav16A0A075B653 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC12.21□□□□□ -0.46
Trav16A0A075B653 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Trav16A0A075B653 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav16A0A075B653 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav16A0A075B653 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trav16A0A075B653 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav16A0A075B653 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav16A0A075B653 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav16A0A075B653 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav16A0A075B653 Slc35b2-202ENSMUST00000223987 1766 ntBASIC12.2□□□□□ -0.46
Trav16A0A075B653 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav16A0A075B653 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav16A0A075B653 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav16A0A075B653 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav16A0A075B653 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav16A0A075B653 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav16A0A075B653 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trav16A0A075B653 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Trav16A0A075B653 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC12.2□□□□□ -0.46
Trav16A0A075B653 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav16A0A075B653 Gm44878-201ENSMUST00000205812 1295 ntBASIC12.2□□□□□ -0.46
Trav16A0A075B653 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav16A0A075B653 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav16A0A075B653 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav16A0A075B653 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav16A0A075B653 Rbfox2-206ENSMUST00000227314 1810 ntBASIC12.2□□□□□ -0.46
Trav16A0A075B653 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav16A0A075B653 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trav16A0A075B653 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Trav16A0A075B653 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav16A0A075B653 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav16A0A075B653 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav16A0A075B653 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav16A0A075B653 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav16A0A075B653 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Trav16A0A075B653 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav16A0A075B653 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav16A0A075B653 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav16A0A075B653 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav16A0A075B653 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav16A0A075B653 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav16A0A075B653 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Trav16A0A075B653 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav16A0A075B653 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav16A0A075B653 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trav16A0A075B653 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav16A0A075B653 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav16A0A075B653 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav16A0A075B653 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav16A0A075B653 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav16A0A075B653 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav16A0A075B653 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav16A0A075B653 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav16A0A075B653 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trav16A0A075B653 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC12.19□□□□□ -0.46
Trav16A0A075B653 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav16A0A075B653 Gm10698-201ENSMUST00000182663 604 ntBASIC12.19□□□□□ -0.46
Trav16A0A075B653 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Trav16A0A075B653 Gm36967-201ENSMUST00000193814 266 ntBASIC12.19□□□□□ -0.46
Trav16A0A075B653 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav16A0A075B653 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav16A0A075B653 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav16A0A075B653 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Trav16A0A075B653 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav16A0A075B653 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
Trav16A0A075B653 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav16A0A075B653 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav16A0A075B653 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav16A0A075B653 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav16A0A075B653 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Trav16A0A075B653 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav16A0A075B653 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav16A0A075B653 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav16A0A075B653 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav16A0A075B653 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav16A0A075B653 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav16A0A075B653 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav16A0A075B653 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav16A0A075B653 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav16A0A075B653 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav16A0A075B653 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav16A0A075B653 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Trav16A0A075B653 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav16A0A075B653 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav16A0A075B653 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC12.18□□□□□ -0.46
Trav16A0A075B653 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav16A0A075B653 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav16A0A075B653 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav16A0A075B653 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav16A0A075B653 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav16A0A075B653 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav16A0A075B653 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav16A0A075B653 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav16A0A075B653 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav16A0A075B653 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav16A0A075B653 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav16A0A075B653 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav16A0A075B653 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav16A0A075B653 Timm23-208ENSMUST00000226683 750 ntBASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms