Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav5-4A0A075B652 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Trav5-4A0A075B652 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav5-4A0A075B652 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
Trav5-4A0A075B652 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.3
Trav5-4A0A075B652 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Trav5-4A0A075B652 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav5-4A0A075B652 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav5-4A0A075B652 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav5-4A0A075B652 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Trav5-4A0A075B652 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav5-4A0A075B652 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC13.2□□□□□ -0.3
Trav5-4A0A075B652 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav5-4A0A075B652 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav5-4A0A075B652 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav5-4A0A075B652 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav5-4A0A075B652 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav5-4A0A075B652 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Trav5-4A0A075B652 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Trav5-4A0A075B652 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Trav5-4A0A075B652 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC13.2□□□□□ -0.3
Trav5-4A0A075B652 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Trav5-4A0A075B652 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav5-4A0A075B652 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Trav5-4A0A075B652 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC13.2□□□□□ -0.3
Trav5-4A0A075B652 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
Trav5-4A0A075B652 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav5-4A0A075B652 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav5-4A0A075B652 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Trav5-4A0A075B652 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav5-4A0A075B652 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav5-4A0A075B652 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav5-4A0A075B652 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav5-4A0A075B652 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trav5-4A0A075B652 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav5-4A0A075B652 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC13.2□□□□□ -0.3
Trav5-4A0A075B652 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Trav5-4A0A075B652 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav5-4A0A075B652 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav5-4A0A075B652 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Trav5-4A0A075B652 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav5-4A0A075B652 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav5-4A0A075B652 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav5-4A0A075B652 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav5-4A0A075B652 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav5-4A0A075B652 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav5-4A0A075B652 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
Trav5-4A0A075B652 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav5-4A0A075B652 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trav5-4A0A075B652 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav5-4A0A075B652 Mir770-201ENSMUST00000103252 94 ntBASIC13.19□□□□□ -0.3
Trav5-4A0A075B652 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav5-4A0A075B652 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav5-4A0A075B652 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Trav5-4A0A075B652 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trav5-4A0A075B652 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trav5-4A0A075B652 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC13.19□□□□□ -0.3
Trav5-4A0A075B652 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav5-4A0A075B652 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav5-4A0A075B652 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav5-4A0A075B652 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav5-4A0A075B652 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav5-4A0A075B652 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav5-4A0A075B652 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav5-4A0A075B652 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav5-4A0A075B652 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav5-4A0A075B652 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav5-4A0A075B652 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav5-4A0A075B652 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Trav5-4A0A075B652 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav5-4A0A075B652 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav5-4A0A075B652 Zkscan4-202ENSMUST00000225845 1506 ntBASIC13.18□□□□□ -0.3
Trav5-4A0A075B652 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav5-4A0A075B652 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC13.18□□□□□ -0.3
Trav5-4A0A075B652 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav5-4A0A075B652 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav5-4A0A075B652 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav5-4A0A075B652 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav5-4A0A075B652 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trav5-4A0A075B652 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav5-4A0A075B652 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav5-4A0A075B652 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav5-4A0A075B652 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav5-4A0A075B652 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Trav5-4A0A075B652 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC13.18□□□□□ -0.3
Trav5-4A0A075B652 Gm44430-201ENSMUST00000203376 995 ntBASIC13.18□□□□□ -0.3
Trav5-4A0A075B652 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Trav5-4A0A075B652 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav5-4A0A075B652 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav5-4A0A075B652 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav5-4A0A075B652 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Trav5-4A0A075B652 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav5-4A0A075B652 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav5-4A0A075B652 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav5-4A0A075B652 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav5-4A0A075B652 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav5-4A0A075B652 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav5-4A0A075B652 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav5-4A0A075B652 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav5-4A0A075B652 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms