Protein–RNA interactions for Protein: A0A075B649

Trav13-2, T cell receptor alpha variable 13-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-2A0A075B649 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Trav13-2A0A075B649 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Trav13-2A0A075B649 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13-2A0A075B649 Gm13186-201ENSMUST00000118031 316 ntBASIC10.61□□□□□ -0.71
Trav13-2A0A075B649 Gm14464-201ENSMUST00000119658 1254 ntBASIC10.61□□□□□ -0.71
Trav13-2A0A075B649 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC10.61□□□□□ -0.71
Trav13-2A0A075B649 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13-2A0A075B649 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC10.61□□□□□ -0.71
Trav13-2A0A075B649 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC10.61□□□□□ -0.71
Trav13-2A0A075B649 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13-2A0A075B649 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13-2A0A075B649 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13-2A0A075B649 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13-2A0A075B649 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13-2A0A075B649 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13-2A0A075B649 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13-2A0A075B649 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC10.61□□□□□ -0.71
Trav13-2A0A075B649 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13-2A0A075B649 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13-2A0A075B649 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13-2A0A075B649 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13-2A0A075B649 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13-2A0A075B649 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13-2A0A075B649 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Trav13-2A0A075B649 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13-2A0A075B649 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13-2A0A075B649 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13-2A0A075B649 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13-2A0A075B649 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13-2A0A075B649 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC10.6□□□□□ -0.71
Trav13-2A0A075B649 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13-2A0A075B649 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Trav13-2A0A075B649 Ap5m1-205ENSMUST00000227431 3757 ntBASIC10.6□□□□□ -0.71
Trav13-2A0A075B649 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC10.6□□□□□ -0.71
Trav13-2A0A075B649 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13-2A0A075B649 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Trav13-2A0A075B649 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13-2A0A075B649 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13-2A0A075B649 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13-2A0A075B649 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13-2A0A075B649 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13-2A0A075B649 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13-2A0A075B649 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13-2A0A075B649 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC10.6□□□□□ -0.71
Trav13-2A0A075B649 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC10.6□□□□□ -0.71
Trav13-2A0A075B649 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13-2A0A075B649 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Trav13-2A0A075B649 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13-2A0A075B649 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13-2A0A075B649 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13-2A0A075B649 AC175538.1-201ENSMUST00000225343 1269 ntBASIC10.6□□□□□ -0.71
Trav13-2A0A075B649 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC10.6□□□□□ -0.71
Trav13-2A0A075B649 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13-2A0A075B649 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13-2A0A075B649 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13-2A0A075B649 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13-2A0A075B649 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13-2A0A075B649 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13-2A0A075B649 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13-2A0A075B649 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13-2A0A075B649 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13-2A0A075B649 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13-2A0A075B649 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC10.6□□□□□ -0.71
Trav13-2A0A075B649 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13-2A0A075B649 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
Trav13-2A0A075B649 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13-2A0A075B649 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13-2A0A075B649 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC10.6□□□□□ -0.71
Trav13-2A0A075B649 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC10.6□□□□□ -0.71
Trav13-2A0A075B649 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13-2A0A075B649 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav13-2A0A075B649 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav13-2A0A075B649 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC10.59□□□□□ -0.71
Trav13-2A0A075B649 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav13-2A0A075B649 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav13-2A0A075B649 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav13-2A0A075B649 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav13-2A0A075B649 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav13-2A0A075B649 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trav13-2A0A075B649 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav13-2A0A075B649 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC10.59□□□□□ -0.71
Trav13-2A0A075B649 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trav13-2A0A075B649 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC10.59□□□□□ -0.71
Trav13-2A0A075B649 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Trav13-2A0A075B649 Gm13181-201ENSMUST00000120117 1069 ntBASIC10.59□□□□□ -0.71
Trav13-2A0A075B649 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trav13-2A0A075B649 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC10.59□□□□□ -0.71
Trav13-2A0A075B649 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Trav13-2A0A075B649 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC10.59□□□□□ -0.71
Trav13-2A0A075B649 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav13-2A0A075B649 Zfp264-201ENSMUST00000208656 1563 ntBASIC10.59□□□□□ -0.71
Trav13-2A0A075B649 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Trav13-2A0A075B649 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Trav13-2A0A075B649 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav13-2A0A075B649 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav13-2A0A075B649 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC10.59□□□□□ -0.71
Trav13-2A0A075B649 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trav13-2A0A075B649 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav13-2A0A075B649 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav13-2A0A075B649 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms