Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav8n-2A0A075B633 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Trav8n-2A0A075B633 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.38□□□□□ -0.11
Trav8n-2A0A075B633 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav8n-2A0A075B633 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav8n-2A0A075B633 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Trav8n-2A0A075B633 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav8n-2A0A075B633 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Trav8n-2A0A075B633 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav8n-2A0A075B633 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav8n-2A0A075B633 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trav8n-2A0A075B633 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav8n-2A0A075B633 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav8n-2A0A075B633 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav8n-2A0A075B633 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav8n-2A0A075B633 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav8n-2A0A075B633 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav8n-2A0A075B633 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav8n-2A0A075B633 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trav8n-2A0A075B633 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Trav8n-2A0A075B633 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav8n-2A0A075B633 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Trav8n-2A0A075B633 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav8n-2A0A075B633 Gm13616-201ENSMUST00000120600 222 ntBASIC14.37□□□□□ -0.11
Trav8n-2A0A075B633 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav8n-2A0A075B633 Gm5177-201ENSMUST00000183092 997 ntBASIC14.37□□□□□ -0.11
Trav8n-2A0A075B633 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC14.37□□□□□ -0.11
Trav8n-2A0A075B633 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Trav8n-2A0A075B633 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav8n-2A0A075B633 AC139382.1-201ENSMUST00000221402 498 ntBASIC14.37□□□□□ -0.11
Trav8n-2A0A075B633 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav8n-2A0A075B633 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav8n-2A0A075B633 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC14.37□□□□□ -0.11
Trav8n-2A0A075B633 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.37□□□□□ -0.11
Trav8n-2A0A075B633 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Trav8n-2A0A075B633 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav8n-2A0A075B633 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav8n-2A0A075B633 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav8n-2A0A075B633 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav8n-2A0A075B633 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Trav8n-2A0A075B633 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav8n-2A0A075B633 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav8n-2A0A075B633 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.37□□□□□ -0.11
Trav8n-2A0A075B633 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trav8n-2A0A075B633 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trav8n-2A0A075B633 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Trav8n-2A0A075B633 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav8n-2A0A075B633 Nrn1-204ENSMUST00000224323 1779 ntBASIC14.37□□□□□ -0.11
Trav8n-2A0A075B633 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav8n-2A0A075B633 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav8n-2A0A075B633 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC14.37□□□□□ -0.11
Trav8n-2A0A075B633 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Trav8n-2A0A075B633 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav8n-2A0A075B633 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav8n-2A0A075B633 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav8n-2A0A075B633 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav8n-2A0A075B633 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Trav8n-2A0A075B633 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav8n-2A0A075B633 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav8n-2A0A075B633 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav8n-2A0A075B633 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC14.36□□□□□ -0.11
Trav8n-2A0A075B633 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Trav8n-2A0A075B633 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.36□□□□□ -0.11
Trav8n-2A0A075B633 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav8n-2A0A075B633 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav8n-2A0A075B633 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav8n-2A0A075B633 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav8n-2A0A075B633 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav8n-2A0A075B633 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav8n-2A0A075B633 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav8n-2A0A075B633 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC14.36□□□□□ -0.11
Trav8n-2A0A075B633 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14.36□□□□□ -0.11
Trav8n-2A0A075B633 Gm5312-201ENSMUST00000203728 547 ntBASIC14.36□□□□□ -0.11
Trav8n-2A0A075B633 Gm45612-201ENSMUST00000211320 160 ntBASIC14.36□□□□□ -0.11
Trav8n-2A0A075B633 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC14.36□□□□□ -0.11
Trav8n-2A0A075B633 AC155252.2-201ENSMUST00000226946 680 ntBASIC14.36□□□□□ -0.11
Trav8n-2A0A075B633 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Trav8n-2A0A075B633 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav8n-2A0A075B633 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav8n-2A0A075B633 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav8n-2A0A075B633 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav8n-2A0A075B633 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.36□□□□□ -0.11
Trav8n-2A0A075B633 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav8n-2A0A075B633 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav8n-2A0A075B633 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav8n-2A0A075B633 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav8n-2A0A075B633 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Trav8n-2A0A075B633 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav8n-2A0A075B633 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav8n-2A0A075B633 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav8n-2A0A075B633 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav8n-2A0A075B633 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC14.35□□□□□ -0.11
Trav8n-2A0A075B633 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Trav8n-2A0A075B633 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav8n-2A0A075B633 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav8n-2A0A075B633 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC14.35□□□□□ -0.11
Trav8n-2A0A075B633 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav8n-2A0A075B633 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC14.35□□□□□ -0.11
Trav8n-2A0A075B633 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC14.35□□□□□ -0.11
Trav8n-2A0A075B633 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms