Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9-1A0A075B601 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9-1A0A075B601 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9-1A0A075B601 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9-1A0A075B601 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9-1A0A075B601 AC154412.1-201ENSMUST00000226540 2786 ntBASIC12.34□□□□□ -0.43
Trav9-1A0A075B601 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9-1A0A075B601 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9-1A0A075B601 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9-1A0A075B601 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav9-1A0A075B601 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav9-1A0A075B601 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav9-1A0A075B601 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Trav9-1A0A075B601 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav9-1A0A075B601 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav9-1A0A075B601 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav9-1A0A075B601 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav9-1A0A075B601 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav9-1A0A075B601 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trav9-1A0A075B601 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav9-1A0A075B601 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav9-1A0A075B601 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav9-1A0A075B601 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Trav9-1A0A075B601 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC12.33□□□□□ -0.44
Trav9-1A0A075B601 Gm44430-201ENSMUST00000203376 995 ntBASIC12.33□□□□□ -0.44
Trav9-1A0A075B601 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Trav9-1A0A075B601 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Trav9-1A0A075B601 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav9-1A0A075B601 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Trav9-1A0A075B601 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Trav9-1A0A075B601 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Trav9-1A0A075B601 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav9-1A0A075B601 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Trav9-1A0A075B601 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav9-1A0A075B601 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav9-1A0A075B601 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav9-1A0A075B601 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav9-1A0A075B601 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav9-1A0A075B601 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav9-1A0A075B601 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav9-1A0A075B601 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav9-1A0A075B601 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav9-1A0A075B601 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav9-1A0A075B601 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Trav9-1A0A075B601 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Trav9-1A0A075B601 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9-1A0A075B601 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9-1A0A075B601 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC12.32□□□□□ -0.44
Trav9-1A0A075B601 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9-1A0A075B601 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9-1A0A075B601 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC12.32□□□□□ -0.44
Trav9-1A0A075B601 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9-1A0A075B601 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9-1A0A075B601 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Trav9-1A0A075B601 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9-1A0A075B601 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trav9-1A0A075B601 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Trav9-1A0A075B601 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9-1A0A075B601 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9-1A0A075B601 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC12.32□□□□□ -0.44
Trav9-1A0A075B601 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trav9-1A0A075B601 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9-1A0A075B601 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9-1A0A075B601 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9-1A0A075B601 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9-1A0A075B601 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC12.32□□□□□ -0.44
Trav9-1A0A075B601 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9-1A0A075B601 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9-1A0A075B601 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9-1A0A075B601 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9-1A0A075B601 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9-1A0A075B601 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9-1A0A075B601 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9-1A0A075B601 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Trav9-1A0A075B601 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9-1A0A075B601 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9-1A0A075B601 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9-1A0A075B601 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9-1A0A075B601 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9-1A0A075B601 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9-1A0A075B601 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9-1A0A075B601 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC12.31□□□□□ -0.44
Trav9-1A0A075B601 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
Trav9-1A0A075B601 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9-1A0A075B601 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9-1A0A075B601 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Trav9-1A0A075B601 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9-1A0A075B601 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Trav9-1A0A075B601 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9-1A0A075B601 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trav9-1A0A075B601 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9-1A0A075B601 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Trav9-1A0A075B601 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC12.31□□□□□ -0.44
Trav9-1A0A075B601 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9-1A0A075B601 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC12.31□□□□□ -0.44
Trav9-1A0A075B601 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC12.31□□□□□ -0.44
Trav9-1A0A075B601 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9-1A0A075B601 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9-1A0A075B601 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9-1A0A075B601 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms