Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav1A0A075B5Z4 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Trav1A0A075B5Z4 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav1A0A075B5Z4 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav1A0A075B5Z4 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav1A0A075B5Z4 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav1A0A075B5Z4 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav1A0A075B5Z4 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.63□□□□□ -0.07
Trav1A0A075B5Z4 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.63□□□□□ -0.07
Trav1A0A075B5Z4 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav1A0A075B5Z4 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav1A0A075B5Z4 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav1A0A075B5Z4 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav1A0A075B5Z4 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav1A0A075B5Z4 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Trav1A0A075B5Z4 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav1A0A075B5Z4 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.62□□□□□ -0.07
Trav1A0A075B5Z4 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav1A0A075B5Z4 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav1A0A075B5Z4 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav1A0A075B5Z4 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav1A0A075B5Z4 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Trav1A0A075B5Z4 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav1A0A075B5Z4 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav1A0A075B5Z4 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav1A0A075B5Z4 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav1A0A075B5Z4 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC14.62□□□□□ -0.07
Trav1A0A075B5Z4 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav1A0A075B5Z4 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Trav1A0A075B5Z4 Gm13836-201ENSMUST00000121159 501 ntBASIC14.62□□□□□ -0.07
Trav1A0A075B5Z4 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Trav1A0A075B5Z4 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Trav1A0A075B5Z4 Gm9172-201ENSMUST00000212092 954 ntBASIC14.62□□□□□ -0.07
Trav1A0A075B5Z4 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav1A0A075B5Z4 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav1A0A075B5Z4 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav1A0A075B5Z4 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav1A0A075B5Z4 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav1A0A075B5Z4 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav1A0A075B5Z4 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.62□□□□□ -0.07
Trav1A0A075B5Z4 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav1A0A075B5Z4 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav1A0A075B5Z4 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav1A0A075B5Z4 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav1A0A075B5Z4 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.61□□□□□ -0.07
Trav1A0A075B5Z4 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav1A0A075B5Z4 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav1A0A075B5Z4 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav1A0A075B5Z4 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav1A0A075B5Z4 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav1A0A075B5Z4 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav1A0A075B5Z4 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav1A0A075B5Z4 Gm4609-201ENSMUST00000106443 1002 ntBASIC14.61□□□□□ -0.07
Trav1A0A075B5Z4 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC14.61□□□□□ -0.07
Trav1A0A075B5Z4 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Trav1A0A075B5Z4 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC14.61□□□□□ -0.07
Trav1A0A075B5Z4 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Trav1A0A075B5Z4 Gm5138-201ENSMUST00000113842 1002 ntBASIC14.61□□□□□ -0.07
Trav1A0A075B5Z4 Gm15191-201ENSMUST00000117933 1000 ntBASIC14.61□□□□□ -0.07
Trav1A0A075B5Z4 Gm12182-201ENSMUST00000118655 1008 ntBASIC14.61□□□□□ -0.07
Trav1A0A075B5Z4 Gm13882-201ENSMUST00000120886 1002 ntBASIC14.61□□□□□ -0.07
Trav1A0A075B5Z4 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav1A0A075B5Z4 Gm10284-201ENSMUST00000145057 1005 ntBASIC14.61□□□□□ -0.07
Trav1A0A075B5Z4 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC14.61□□□□□ -0.07
Trav1A0A075B5Z4 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC14.61□□□□□ -0.07
Trav1A0A075B5Z4 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav1A0A075B5Z4 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.61□□□□□ -0.07
Trav1A0A075B5Z4 Gm10481-201ENSMUST00000179228 1002 ntBASIC14.61□□□□□ -0.07
Trav1A0A075B5Z4 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC14.61□□□□□ -0.07
Trav1A0A075B5Z4 Gm2574-201ENSMUST00000181051 1002 ntBASIC14.61□□□□□ -0.07
Trav1A0A075B5Z4 Gm3200-201ENSMUST00000181493 1002 ntBASIC14.61□□□□□ -0.07
Trav1A0A075B5Z4 Gm8825-201ENSMUST00000182565 998 ntBASIC14.61□□□□□ -0.07
Trav1A0A075B5Z4 Gm4518-201ENSMUST00000182638 718 ntBASIC14.61□□□□□ -0.07
Trav1A0A075B5Z4 Gm8330-201ENSMUST00000182754 1008 ntBASIC14.61□□□□□ -0.07
Trav1A0A075B5Z4 Gm4575-201ENSMUST00000182991 1002 ntBASIC14.61□□□□□ -0.07
Trav1A0A075B5Z4 Gm8709-201ENSMUST00000183230 1012 ntBASIC14.61□□□□□ -0.07
Trav1A0A075B5Z4 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav1A0A075B5Z4 Vti1a-206ENSMUST00000225529 1244 ntBASIC14.61□□□□□ -0.07
Trav1A0A075B5Z4 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav1A0A075B5Z4 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav1A0A075B5Z4 Gm10293-201ENSMUST00000076317 1002 ntBASIC14.61□□□□□ -0.07
Trav1A0A075B5Z4 Gm6316-201ENSMUST00000082064 1020 ntBASIC14.61□□□□□ -0.07
Trav1A0A075B5Z4 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav1A0A075B5Z4 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav1A0A075B5Z4 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav1A0A075B5Z4 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav1A0A075B5Z4 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav1A0A075B5Z4 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav1A0A075B5Z4 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
Trav1A0A075B5Z4 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav1A0A075B5Z4 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav1A0A075B5Z4 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav1A0A075B5Z4 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Trav1A0A075B5Z4 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav1A0A075B5Z4 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav1A0A075B5Z4 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav1A0A075B5Z4 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav1A0A075B5Z4 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav1A0A075B5Z4 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Trav1A0A075B5Z4 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms