Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
H2afb1S4R1E0 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H2afb1S4R1E0 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC14.35□□□□□ -0.11
H2afb1S4R1E0 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
H2afb1S4R1E0 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
H2afb1S4R1E0 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H2afb1S4R1E0 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
H2afb1S4R1E0 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.35□□□□□ -0.11
H2afb1S4R1E0 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H2afb1S4R1E0 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
H2afb1S4R1E0 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2afb1S4R1E0 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
H2afb1S4R1E0 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
H2afb1S4R1E0 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2afb1S4R1E0 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2afb1S4R1E0 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
H2afb1S4R1E0 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2afb1S4R1E0 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2afb1S4R1E0 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
H2afb1S4R1E0 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2afb1S4R1E0 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
H2afb1S4R1E0 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC14.34□□□□□ -0.11
H2afb1S4R1E0 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2afb1S4R1E0 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC14.34□□□□□ -0.11
H2afb1S4R1E0 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC14.34□□□□□ -0.11
H2afb1S4R1E0 Gm43799-201ENSMUST00000201845 579 ntBASIC14.34□□□□□ -0.11
H2afb1S4R1E0 AC134329.2-201ENSMUST00000217897 428 ntBASIC14.34□□□□□ -0.11
H2afb1S4R1E0 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC14.34□□□□□ -0.11
H2afb1S4R1E0 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2afb1S4R1E0 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2afb1S4R1E0 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2afb1S4R1E0 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2afb1S4R1E0 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2afb1S4R1E0 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
H2afb1S4R1E0 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2afb1S4R1E0 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2afb1S4R1E0 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2afb1S4R1E0 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2afb1S4R1E0 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
H2afb1S4R1E0 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.33□□□□□ -0.12
H2afb1S4R1E0 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
H2afb1S4R1E0 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
H2afb1S4R1E0 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
H2afb1S4R1E0 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
H2afb1S4R1E0 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC14.33□□□□□ -0.12
H2afb1S4R1E0 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
H2afb1S4R1E0 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
H2afb1S4R1E0 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC14.33□□□□□ -0.12
H2afb1S4R1E0 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
H2afb1S4R1E0 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
H2afb1S4R1E0 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
H2afb1S4R1E0 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
H2afb1S4R1E0 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
H2afb1S4R1E0 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
H2afb1S4R1E0 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
H2afb1S4R1E0 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
H2afb1S4R1E0 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
H2afb1S4R1E0 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
H2afb1S4R1E0 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
H2afb1S4R1E0 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
H2afb1S4R1E0 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
H2afb1S4R1E0 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.33□□□□□ -0.12
H2afb1S4R1E0 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.32□□□□□ -0.12
H2afb1S4R1E0 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
H2afb1S4R1E0 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
H2afb1S4R1E0 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2afb1S4R1E0 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
H2afb1S4R1E0 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2afb1S4R1E0 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2afb1S4R1E0 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2afb1S4R1E0 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2afb1S4R1E0 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2afb1S4R1E0 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC14.32□□□□□ -0.12
H2afb1S4R1E0 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC14.32□□□□□ -0.12
H2afb1S4R1E0 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC14.32□□□□□ -0.12
H2afb1S4R1E0 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2afb1S4R1E0 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2afb1S4R1E0 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2afb1S4R1E0 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2afb1S4R1E0 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2afb1S4R1E0 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
H2afb1S4R1E0 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2afb1S4R1E0 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2afb1S4R1E0 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2afb1S4R1E0 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
H2afb1S4R1E0 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H2afb1S4R1E0 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
H2afb1S4R1E0 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H2afb1S4R1E0 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
H2afb1S4R1E0 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
H2afb1S4R1E0 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
H2afb1S4R1E0 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H2afb1S4R1E0 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H2afb1S4R1E0 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC14.31□□□□□ -0.12
H2afb1S4R1E0 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
H2afb1S4R1E0 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
H2afb1S4R1E0 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC14.31□□□□□ -0.12
H2afb1S4R1E0 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
H2afb1S4R1E0 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
H2afb1S4R1E0 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms