Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smarcb1Q9Z0H3 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smarcb1Q9Z0H3 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcb1Q9Z0H3 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcb1Q9Z0H3 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcb1Q9Z0H3 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcb1Q9Z0H3 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcb1Q9Z0H3 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcb1Q9Z0H3 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC16.31■□□□□ 0.2
Smarcb1Q9Z0H3 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcb1Q9Z0H3 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcb1Q9Z0H3 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcb1Q9Z0H3 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcb1Q9Z0H3 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Smarcb1Q9Z0H3 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Smarcb1Q9Z0H3 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcb1Q9Z0H3 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcb1Q9Z0H3 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcb1Q9Z0H3 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcb1Q9Z0H3 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Smarcb1Q9Z0H3 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcb1Q9Z0H3 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcb1Q9Z0H3 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.31■□□□□ 0.2
Smarcb1Q9Z0H3 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Smarcb1Q9Z0H3 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC16.31■□□□□ 0.2
Smarcb1Q9Z0H3 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcb1Q9Z0H3 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC16.31■□□□□ 0.2
Smarcb1Q9Z0H3 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC16.31■□□□□ 0.2
Smarcb1Q9Z0H3 AC151836.1-202ENSMUST00000226259 753 ntBASIC16.31■□□□□ 0.2
Smarcb1Q9Z0H3 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcb1Q9Z0H3 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcb1Q9Z0H3 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcb1Q9Z0H3 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Smarcb1Q9Z0H3 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcb1Q9Z0H3 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smarcb1Q9Z0H3 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.31■□□□□ 0.2
Smarcb1Q9Z0H3 Gm38327-201ENSMUST00000195852 1755 ntBASIC16.31■□□□□ 0.2
Smarcb1Q9Z0H3 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.3■□□□□ 0.2
Smarcb1Q9Z0H3 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcb1Q9Z0H3 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcb1Q9Z0H3 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcb1Q9Z0H3 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcb1Q9Z0H3 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Smarcb1Q9Z0H3 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcb1Q9Z0H3 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcb1Q9Z0H3 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcb1Q9Z0H3 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcb1Q9Z0H3 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcb1Q9Z0H3 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcb1Q9Z0H3 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcb1Q9Z0H3 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcb1Q9Z0H3 Gm14722-201ENSMUST00000118943 689 ntBASIC16.3■□□□□ 0.2
Smarcb1Q9Z0H3 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcb1Q9Z0H3 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcb1Q9Z0H3 AC122024.2-201ENSMUST00000220086 871 ntBASIC16.3■□□□□ 0.2
Smarcb1Q9Z0H3 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC16.3■□□□□ 0.2
Smarcb1Q9Z0H3 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcb1Q9Z0H3 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC16.3■□□□□ 0.2
Smarcb1Q9Z0H3 Gm5867-201ENSMUST00000063197 592 ntBASIC16.3■□□□□ 0.2
Smarcb1Q9Z0H3 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcb1Q9Z0H3 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcb1Q9Z0H3 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcb1Q9Z0H3 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Smarcb1Q9Z0H3 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcb1Q9Z0H3 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcb1Q9Z0H3 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcb1Q9Z0H3 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcb1Q9Z0H3 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcb1Q9Z0H3 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcb1Q9Z0H3 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smarcb1Q9Z0H3 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smarcb1Q9Z0H3 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smarcb1Q9Z0H3 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smarcb1Q9Z0H3 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Smarcb1Q9Z0H3 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
Smarcb1Q9Z0H3 Gm14494-201ENSMUST00000118786 435 ntBASIC16.29■□□□□ 0.2
Smarcb1Q9Z0H3 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC16.29■□□□□ 0.2
Smarcb1Q9Z0H3 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smarcb1Q9Z0H3 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smarcb1Q9Z0H3 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smarcb1Q9Z0H3 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smarcb1Q9Z0H3 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smarcb1Q9Z0H3 Gm44729-201ENSMUST00000206759 2052 ntBASIC16.28■□□□□ 0.2
Smarcb1Q9Z0H3 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smarcb1Q9Z0H3 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smarcb1Q9Z0H3 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smarcb1Q9Z0H3 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Smarcb1Q9Z0H3 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smarcb1Q9Z0H3 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smarcb1Q9Z0H3 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC16.28■□□□□ 0.2
Smarcb1Q9Z0H3 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC16.28■□□□□ 0.2
Smarcb1Q9Z0H3 Gm4899-201ENSMUST00000178708 719 ntBASIC16.28■□□□□ 0.2
Smarcb1Q9Z0H3 Gm2756-201ENSMUST00000195851 400 ntBASIC16.28■□□□□ 0.2
Smarcb1Q9Z0H3 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Smarcb1Q9Z0H3 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smarcb1Q9Z0H3 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Smarcb1Q9Z0H3 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smarcb1Q9Z0H3 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
Smarcb1Q9Z0H3 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Smarcb1Q9Z0H3 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms