Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Gm43353-201ENSMUST00000199224 1295 ntBASIC13.39□□□□□ -0.27
Cx3cr1Q9Z0D9 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC13.39□□□□□ -0.27
Cx3cr1Q9Z0D9 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC13.39□□□□□ -0.27
Cx3cr1Q9Z0D9 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cx3cr1Q9Z0D9 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Cx3cr1Q9Z0D9 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cx3cr1Q9Z0D9 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Cx3cr1Q9Z0D9 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cx3cr1Q9Z0D9 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cx3cr1Q9Z0D9 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cx3cr1Q9Z0D9 Gm14026-201ENSMUST00000120625 1789 ntBASIC13.39□□□□□ -0.27
Cx3cr1Q9Z0D9 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cx3cr1Q9Z0D9 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cx3cr1Q9Z0D9 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cx3cr1Q9Z0D9 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cx3cr1Q9Z0D9 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC13.39□□□□□ -0.27
Cx3cr1Q9Z0D9 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cx3cr1Q9Z0D9 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Cx3cr1Q9Z0D9 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cx3cr1Q9Z0D9 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Cx3cr1Q9Z0D9 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cx3cr1Q9Z0D9 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cx3cr1Q9Z0D9 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cx3cr1Q9Z0D9 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC13.39□□□□□ -0.27
Cx3cr1Q9Z0D9 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cx3cr1Q9Z0D9 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC13.38□□□□□ -0.27
Cx3cr1Q9Z0D9 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cx3cr1Q9Z0D9 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cx3cr1Q9Z0D9 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cx3cr1Q9Z0D9 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cx3cr1Q9Z0D9 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cx3cr1Q9Z0D9 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cx3cr1Q9Z0D9 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Cx3cr1Q9Z0D9 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cx3cr1Q9Z0D9 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cx3cr1Q9Z0D9 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cx3cr1Q9Z0D9 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cx3cr1Q9Z0D9 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC13.38□□□□□ -0.27
Cx3cr1Q9Z0D9 AC154649.1-201ENSMUST00000227392 384 ntBASIC13.38□□□□□ -0.27
Cx3cr1Q9Z0D9 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Cx3cr1Q9Z0D9 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cx3cr1Q9Z0D9 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cx3cr1Q9Z0D9 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cx3cr1Q9Z0D9 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC13.38□□□□□ -0.27
Cx3cr1Q9Z0D9 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cx3cr1Q9Z0D9 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Cx3cr1Q9Z0D9 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cx3cr1Q9Z0D9 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC13.38□□□□□ -0.27
Cx3cr1Q9Z0D9 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
Cx3cr1Q9Z0D9 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cx3cr1Q9Z0D9 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cx3cr1Q9Z0D9 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cx3cr1Q9Z0D9 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cx3cr1Q9Z0D9 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cx3cr1Q9Z0D9 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cx3cr1Q9Z0D9 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cx3cr1Q9Z0D9 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cx3cr1Q9Z0D9 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cx3cr1Q9Z0D9 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cx3cr1Q9Z0D9 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Cx3cr1Q9Z0D9 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC13.37□□□□□ -0.27
Cx3cr1Q9Z0D9 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cx3cr1Q9Z0D9 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC13.37□□□□□ -0.27
Cx3cr1Q9Z0D9 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cx3cr1Q9Z0D9 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cx3cr1Q9Z0D9 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cx3cr1Q9Z0D9 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC13.37□□□□□ -0.27
Cx3cr1Q9Z0D9 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC13.37□□□□□ -0.27
Cx3cr1Q9Z0D9 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
Cx3cr1Q9Z0D9 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cx3cr1Q9Z0D9 Arhgef4-208ENSMUST00000211073 171 ntBASIC13.37□□□□□ -0.27
Cx3cr1Q9Z0D9 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cx3cr1Q9Z0D9 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cx3cr1Q9Z0D9 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cx3cr1Q9Z0D9 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cx3cr1Q9Z0D9 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cx3cr1Q9Z0D9 BC037039-201ENSMUST00000192003 2205 ntBASIC13.37□□□□□ -0.27
Cx3cr1Q9Z0D9 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC13.37□□□□□ -0.27
Cx3cr1Q9Z0D9 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC13.37□□□□□ -0.27
Cx3cr1Q9Z0D9 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC13.37□□□□□ -0.27
Cx3cr1Q9Z0D9 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cx3cr1Q9Z0D9 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cx3cr1Q9Z0D9 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC13.37□□□□□ -0.27
Cx3cr1Q9Z0D9 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cx3cr1Q9Z0D9 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cx3cr1Q9Z0D9 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Cx3cr1Q9Z0D9 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cx3cr1Q9Z0D9 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cx3cr1Q9Z0D9 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC13.36□□□□□ -0.27
Cx3cr1Q9Z0D9 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cx3cr1Q9Z0D9 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cx3cr1Q9Z0D9 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cx3cr1Q9Z0D9 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC13.36□□□□□ -0.27
Cx3cr1Q9Z0D9 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cx3cr1Q9Z0D9 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cx3cr1Q9Z0D9 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cx3cr1Q9Z0D9 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cx3cr1Q9Z0D9 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
Cx3cr1Q9Z0D9 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC13.36□□□□□ -0.27
Cx3cr1Q9Z0D9 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms