Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CcsQ9WU84 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CcsQ9WU84 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CcsQ9WU84 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CcsQ9WU84 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
CcsQ9WU84 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC12.31□□□□□ -0.44
CcsQ9WU84 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CcsQ9WU84 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CcsQ9WU84 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CcsQ9WU84 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CcsQ9WU84 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CcsQ9WU84 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC12.3□□□□□ -0.44
CcsQ9WU84 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CcsQ9WU84 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC12.3□□□□□ -0.44
CcsQ9WU84 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CcsQ9WU84 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CcsQ9WU84 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
CcsQ9WU84 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
CcsQ9WU84 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CcsQ9WU84 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CcsQ9WU84 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
CcsQ9WU84 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CcsQ9WU84 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC12.3□□□□□ -0.44
CcsQ9WU84 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CcsQ9WU84 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CcsQ9WU84 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CcsQ9WU84 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
CcsQ9WU84 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CcsQ9WU84 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
CcsQ9WU84 Gm13836-201ENSMUST00000121159 501 ntBASIC12.3□□□□□ -0.44
CcsQ9WU84 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC12.3□□□□□ -0.44
CcsQ9WU84 Gm20472-201ENSMUST00000174403 1240 ntBASIC12.3□□□□□ -0.44
CcsQ9WU84 Gm30025-201ENSMUST00000218555 728 ntBASIC12.3□□□□□ -0.44
CcsQ9WU84 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
CcsQ9WU84 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CcsQ9WU84 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CcsQ9WU84 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC12.3□□□□□ -0.44
CcsQ9WU84 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CcsQ9WU84 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CcsQ9WU84 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CcsQ9WU84 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC12.3□□□□□ -0.44
CcsQ9WU84 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CcsQ9WU84 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CcsQ9WU84 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CcsQ9WU84 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CcsQ9WU84 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CcsQ9WU84 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CcsQ9WU84 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CcsQ9WU84 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
CcsQ9WU84 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CcsQ9WU84 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CcsQ9WU84 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
CcsQ9WU84 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CcsQ9WU84 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CcsQ9WU84 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CcsQ9WU84 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
CcsQ9WU84 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CcsQ9WU84 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CcsQ9WU84 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC12.29□□□□□ -0.44
CcsQ9WU84 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CcsQ9WU84 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CcsQ9WU84 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CcsQ9WU84 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CcsQ9WU84 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC12.29□□□□□ -0.44
CcsQ9WU84 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC12.29□□□□□ -0.44
CcsQ9WU84 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC12.29□□□□□ -0.44
CcsQ9WU84 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CcsQ9WU84 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CcsQ9WU84 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CcsQ9WU84 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CcsQ9WU84 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CcsQ9WU84 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CcsQ9WU84 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CcsQ9WU84 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
CcsQ9WU84 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CcsQ9WU84 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
CcsQ9WU84 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
CcsQ9WU84 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CcsQ9WU84 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CcsQ9WU84 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CcsQ9WU84 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CcsQ9WU84 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CcsQ9WU84 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CcsQ9WU84 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CcsQ9WU84 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CcsQ9WU84 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
CcsQ9WU84 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CcsQ9WU84 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
CcsQ9WU84 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CcsQ9WU84 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
CcsQ9WU84 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CcsQ9WU84 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
CcsQ9WU84 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CcsQ9WU84 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CcsQ9WU84 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
CcsQ9WU84 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CcsQ9WU84 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC12.28□□□□□ -0.44
CcsQ9WU84 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CcsQ9WU84 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC12.28□□□□□ -0.44
CcsQ9WU84 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms