Protein–RNA interactions for Protein: Q9R1A9

Trex2, Three prime repair exonuclease 2, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex2Q9R1A9 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trex2Q9R1A9 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trex2Q9R1A9 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trex2Q9R1A9 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC13.32□□□□□ -0.28
Trex2Q9R1A9 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC13.32□□□□□ -0.28
Trex2Q9R1A9 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trex2Q9R1A9 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trex2Q9R1A9 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trex2Q9R1A9 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trex2Q9R1A9 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trex2Q9R1A9 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trex2Q9R1A9 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC13.32□□□□□ -0.28
Trex2Q9R1A9 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC13.32□□□□□ -0.28
Trex2Q9R1A9 Gm7977-201ENSMUST00000193787 748 ntBASIC13.32□□□□□ -0.28
Trex2Q9R1A9 Gm17808-201ENSMUST00000200859 894 ntBASIC13.32□□□□□ -0.28
Trex2Q9R1A9 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Trex2Q9R1A9 AC153526.5-201ENSMUST00000218661 2147 ntBASIC13.32□□□□□ -0.28
Trex2Q9R1A9 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trex2Q9R1A9 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trex2Q9R1A9 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Trex2Q9R1A9 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC13.32□□□□□ -0.28
Trex2Q9R1A9 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trex2Q9R1A9 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trex2Q9R1A9 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC13.32□□□□□ -0.28
Trex2Q9R1A9 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC13.32□□□□□ -0.28
Trex2Q9R1A9 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Trex2Q9R1A9 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trex2Q9R1A9 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trex2Q9R1A9 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trex2Q9R1A9 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trex2Q9R1A9 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trex2Q9R1A9 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trex2Q9R1A9 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trex2Q9R1A9 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trex2Q9R1A9 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trex2Q9R1A9 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trex2Q9R1A9 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trex2Q9R1A9 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trex2Q9R1A9 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trex2Q9R1A9 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trex2Q9R1A9 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trex2Q9R1A9 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC13.31□□□□□ -0.28
Trex2Q9R1A9 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC13.31□□□□□ -0.28
Trex2Q9R1A9 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trex2Q9R1A9 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC13.31□□□□□ -0.28
Trex2Q9R1A9 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trex2Q9R1A9 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC13.31□□□□□ -0.28
Trex2Q9R1A9 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trex2Q9R1A9 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trex2Q9R1A9 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Trex2Q9R1A9 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trex2Q9R1A9 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC13.31□□□□□ -0.28
Trex2Q9R1A9 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trex2Q9R1A9 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Trex2Q9R1A9 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trex2Q9R1A9 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trex2Q9R1A9 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trex2Q9R1A9 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trex2Q9R1A9 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trex2Q9R1A9 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC13.31□□□□□ -0.28
Trex2Q9R1A9 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Trex2Q9R1A9 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trex2Q9R1A9 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trex2Q9R1A9 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trex2Q9R1A9 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trex2Q9R1A9 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trex2Q9R1A9 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trex2Q9R1A9 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trex2Q9R1A9 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trex2Q9R1A9 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trex2Q9R1A9 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trex2Q9R1A9 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trex2Q9R1A9 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trex2Q9R1A9 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trex2Q9R1A9 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trex2Q9R1A9 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trex2Q9R1A9 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trex2Q9R1A9 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trex2Q9R1A9 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Trex2Q9R1A9 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trex2Q9R1A9 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC13.3□□□□□ -0.28
Trex2Q9R1A9 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trex2Q9R1A9 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trex2Q9R1A9 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Trex2Q9R1A9 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trex2Q9R1A9 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
Trex2Q9R1A9 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trex2Q9R1A9 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trex2Q9R1A9 Gm43072-201ENSMUST00000200283 1671 ntBASIC13.3□□□□□ -0.28
Trex2Q9R1A9 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trex2Q9R1A9 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trex2Q9R1A9 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trex2Q9R1A9 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trex2Q9R1A9 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trex2Q9R1A9 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Trex2Q9R1A9 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trex2Q9R1A9 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
Trex2Q9R1A9 Gm29340-201ENSMUST00000188763 3854 ntBASIC13.29□□□□□ -0.28
Trex2Q9R1A9 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trex2Q9R1A9 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms