Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC13.85□□□□□ -0.19
Nubp1Q9R060 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC13.85□□□□□ -0.19
Nubp1Q9R060 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC13.85□□□□□ -0.19
Nubp1Q9R060 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC13.85□□□□□ -0.19
Nubp1Q9R060 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nubp1Q9R060 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nubp1Q9R060 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nubp1Q9R060 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nubp1Q9R060 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Nubp1Q9R060 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nubp1Q9R060 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nubp1Q9R060 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nubp1Q9R060 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nubp1Q9R060 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nubp1Q9R060 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Nubp1Q9R060 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Nubp1Q9R060 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nubp1Q9R060 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nubp1Q9R060 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nubp1Q9R060 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nubp1Q9R060 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC13.85□□□□□ -0.19
Nubp1Q9R060 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nubp1Q9R060 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Nubp1Q9R060 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nubp1Q9R060 Gm42918-201ENSMUST00000199249 1580 ntBASIC13.84□□□□□ -0.19
Nubp1Q9R060 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Nubp1Q9R060 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nubp1Q9R060 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nubp1Q9R060 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nubp1Q9R060 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nubp1Q9R060 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
Nubp1Q9R060 Gm17271-201ENSMUST00000165535 355 ntBASIC13.84□□□□□ -0.19
Nubp1Q9R060 Gm20834-202ENSMUST00000185576 1220 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Nubp1Q9R060 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC13.84□□□□□ -0.19
Nubp1Q9R060 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nubp1Q9R060 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Nubp1Q9R060 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Nubp1Q9R060 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC13.84□□□□□ -0.19
Nubp1Q9R060 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nubp1Q9R060 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nubp1Q9R060 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nubp1Q9R060 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nubp1Q9R060 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nubp1Q9R060 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Nubp1Q9R060 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC13.83□□□□□ -0.19
Nubp1Q9R060 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nubp1Q9R060 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nubp1Q9R060 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Nubp1Q9R060 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Nubp1Q9R060 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nubp1Q9R060 Gm14201-201ENSMUST00000117627 289 ntBASIC13.83□□□□□ -0.2
Nubp1Q9R060 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC13.83□□□□□ -0.2
Nubp1Q9R060 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nubp1Q9R060 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC13.83□□□□□ -0.2
Nubp1Q9R060 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
Nubp1Q9R060 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Nubp1Q9R060 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nubp1Q9R060 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nubp1Q9R060 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nubp1Q9R060 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nubp1Q9R060 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nubp1Q9R060 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nubp1Q9R060 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nubp1Q9R060 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nubp1Q9R060 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nubp1Q9R060 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC13.83□□□□□ -0.2
Nubp1Q9R060 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nubp1Q9R060 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nubp1Q9R060 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nubp1Q9R060 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nubp1Q9R060 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC13.83□□□□□ -0.2
Nubp1Q9R060 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nubp1Q9R060 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nubp1Q9R060 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nubp1Q9R060 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nubp1Q9R060 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nubp1Q9R060 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nubp1Q9R060 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC13.82□□□□□ -0.2
Nubp1Q9R060 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
Nubp1Q9R060 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nubp1Q9R060 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nubp1Q9R060 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Nubp1Q9R060 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nubp1Q9R060 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nubp1Q9R060 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nubp1Q9R060 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nubp1Q9R060 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC13.82□□□□□ -0.2
Nubp1Q9R060 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nubp1Q9R060 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nubp1Q9R060 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nubp1Q9R060 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nubp1Q9R060 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nubp1Q9R060 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC13.82□□□□□ -0.2
Nubp1Q9R060 Gm11077-201ENSMUST00000111844 84 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Nubp1Q9R060 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nubp1Q9R060 H2af-ps-201ENSMUST00000119066 295 ntBASIC13.82□□□□□ -0.2
Nubp1Q9R060 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nubp1Q9R060 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC13.82□□□□□ -0.2
Nubp1Q9R060 AC125539.1-201ENSMUST00000227423 622 ntBASIC13.82□□□□□ -0.2
Nubp1Q9R060 Prl6a1-201ENSMUST00000091679 1093 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms