Protein–RNA interactions for Protein: Q9R049

Amfr, E3 ubiquitin-protein ligase AMFR, mousemouse

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AmfrQ9R049 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
AmfrQ9R049 Gm7729-201ENSMUST00000050143 801 ntBASIC17.68■□□□□ 0.42
AmfrQ9R049 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC17.68■□□□□ 0.42
AmfrQ9R049 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
AmfrQ9R049 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
AmfrQ9R049 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
AmfrQ9R049 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
AmfrQ9R049 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
AmfrQ9R049 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
AmfrQ9R049 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
AmfrQ9R049 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
AmfrQ9R049 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
AmfrQ9R049 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC17.67■□□□□ 0.42
AmfrQ9R049 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC17.67■□□□□ 0.42
AmfrQ9R049 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC17.67■□□□□ 0.42
AmfrQ9R049 AC153889.1-201ENSMUST00000219257 330 ntBASIC17.67■□□□□ 0.42
AmfrQ9R049 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
AmfrQ9R049 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
AmfrQ9R049 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC17.67■□□□□ 0.42
AmfrQ9R049 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
AmfrQ9R049 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
AmfrQ9R049 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
AmfrQ9R049 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
AmfrQ9R049 Gm44729-201ENSMUST00000206759 2052 ntBASIC17.67■□□□□ 0.42
AmfrQ9R049 Gm44616-201ENSMUST00000206417 1732 ntBASIC17.67■□□□□ 0.42
AmfrQ9R049 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
AmfrQ9R049 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
AmfrQ9R049 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
AmfrQ9R049 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
AmfrQ9R049 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
AmfrQ9R049 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC17.66■□□□□ 0.42
AmfrQ9R049 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
AmfrQ9R049 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
AmfrQ9R049 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
AmfrQ9R049 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC17.66■□□□□ 0.42
AmfrQ9R049 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
AmfrQ9R049 AC153794.1-201ENSMUST00000169148 126 ntBASIC17.66■□□□□ 0.42
AmfrQ9R049 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC17.66■□□□□ 0.42
AmfrQ9R049 AC124569.2-201ENSMUST00000225998 818 ntBASIC17.66■□□□□ 0.42
AmfrQ9R049 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC17.66■□□□□ 0.42
AmfrQ9R049 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
AmfrQ9R049 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
AmfrQ9R049 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
AmfrQ9R049 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
AmfrQ9R049 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
AmfrQ9R049 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
AmfrQ9R049 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
AmfrQ9R049 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
AmfrQ9R049 Rbfox2-206ENSMUST00000227314 1810 ntBASIC17.65■□□□□ 0.42
AmfrQ9R049 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
AmfrQ9R049 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
AmfrQ9R049 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
AmfrQ9R049 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
AmfrQ9R049 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC17.65■□□□□ 0.42
AmfrQ9R049 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC17.65■□□□□ 0.42
AmfrQ9R049 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
AmfrQ9R049 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC17.65■□□□□ 0.42
AmfrQ9R049 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
AmfrQ9R049 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC17.65■□□□□ 0.42
AmfrQ9R049 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
AmfrQ9R049 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
AmfrQ9R049 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
AmfrQ9R049 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
AmfrQ9R049 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
AmfrQ9R049 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
AmfrQ9R049 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
AmfrQ9R049 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
AmfrQ9R049 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
AmfrQ9R049 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC17.64■□□□□ 0.42
AmfrQ9R049 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
AmfrQ9R049 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
AmfrQ9R049 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
AmfrQ9R049 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
AmfrQ9R049 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
AmfrQ9R049 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
AmfrQ9R049 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
AmfrQ9R049 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
AmfrQ9R049 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC17.64■□□□□ 0.41
AmfrQ9R049 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
AmfrQ9R049 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
AmfrQ9R049 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
AmfrQ9R049 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
AmfrQ9R049 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
AmfrQ9R049 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
AmfrQ9R049 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
AmfrQ9R049 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
AmfrQ9R049 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
AmfrQ9R049 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
AmfrQ9R049 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC17.64■□□□□ 0.41
AmfrQ9R049 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
AmfrQ9R049 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
AmfrQ9R049 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
AmfrQ9R049 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
AmfrQ9R049 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
AmfrQ9R049 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
AmfrQ9R049 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
AmfrQ9R049 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
AmfrQ9R049 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
AmfrQ9R049 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
AmfrQ9R049 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms