Protein–RNA interactions for Protein: Q9JIY8

Cml3, Probable N-acetyltransferase CML3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cml3Q9JIY8 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
Cml3Q9JIY8 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Cml3Q9JIY8 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cml3Q9JIY8 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cml3Q9JIY8 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cml3Q9JIY8 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC12.08□□□□□ -0.48
Cml3Q9JIY8 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cml3Q9JIY8 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cml3Q9JIY8 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cml3Q9JIY8 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cml3Q9JIY8 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cml3Q9JIY8 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cml3Q9JIY8 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
Cml3Q9JIY8 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC12.08□□□□□ -0.48
Cml3Q9JIY8 Gm13186-201ENSMUST00000118031 316 ntBASIC12.08□□□□□ -0.48
Cml3Q9JIY8 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cml3Q9JIY8 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC12.08□□□□□ -0.48
Cml3Q9JIY8 AC159205.3-201ENSMUST00000224614 874 ntBASIC12.08□□□□□ -0.48
Cml3Q9JIY8 Odf3b-204ENSMUST00000227834 930 ntBASIC12.08□□□□□ -0.48
Cml3Q9JIY8 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cml3Q9JIY8 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cml3Q9JIY8 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cml3Q9JIY8 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cml3Q9JIY8 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cml3Q9JIY8 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cml3Q9JIY8 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Cml3Q9JIY8 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cml3Q9JIY8 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cml3Q9JIY8 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cml3Q9JIY8 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cml3Q9JIY8 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cml3Q9JIY8 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cml3Q9JIY8 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cml3Q9JIY8 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cml3Q9JIY8 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cml3Q9JIY8 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cml3Q9JIY8 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cml3Q9JIY8 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cml3Q9JIY8 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cml3Q9JIY8 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Cml3Q9JIY8 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC12.07□□□□□ -0.48
Cml3Q9JIY8 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cml3Q9JIY8 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cml3Q9JIY8 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cml3Q9JIY8 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cml3Q9JIY8 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cml3Q9JIY8 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cml3Q9JIY8 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Cml3Q9JIY8 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cml3Q9JIY8 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cml3Q9JIY8 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cml3Q9JIY8 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC12.07□□□□□ -0.48
Cml3Q9JIY8 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cml3Q9JIY8 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Cml3Q9JIY8 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC12.07□□□□□ -0.48
Cml3Q9JIY8 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cml3Q9JIY8 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC12.07□□□□□ -0.48
Cml3Q9JIY8 Slc35b2-207ENSMUST00000226086 850 ntBASIC12.07□□□□□ -0.48
Cml3Q9JIY8 AC154649.1-201ENSMUST00000227392 384 ntBASIC12.07□□□□□ -0.48
Cml3Q9JIY8 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cml3Q9JIY8 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cml3Q9JIY8 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cml3Q9JIY8 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cml3Q9JIY8 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Cml3Q9JIY8 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cml3Q9JIY8 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cml3Q9JIY8 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC12.07□□□□□ -0.48
Cml3Q9JIY8 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cml3Q9JIY8 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cml3Q9JIY8 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Cml3Q9JIY8 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cml3Q9JIY8 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cml3Q9JIY8 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cml3Q9JIY8 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cml3Q9JIY8 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cml3Q9JIY8 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cml3Q9JIY8 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cml3Q9JIY8 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Cml3Q9JIY8 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cml3Q9JIY8 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Cml3Q9JIY8 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cml3Q9JIY8 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cml3Q9JIY8 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cml3Q9JIY8 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cml3Q9JIY8 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cml3Q9JIY8 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cml3Q9JIY8 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cml3Q9JIY8 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Cml3Q9JIY8 Gm20760-201ENSMUST00000179197 648 ntBASIC12.06□□□□□ -0.48
Cml3Q9JIY8 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cml3Q9JIY8 Gm18115-201ENSMUST00000221209 621 ntBASIC12.06□□□□□ -0.48
Cml3Q9JIY8 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC12.06□□□□□ -0.48
Cml3Q9JIY8 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cml3Q9JIY8 Otx2os1-204ENSMUST00000227221 751 ntBASIC12.06□□□□□ -0.48
Cml3Q9JIY8 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC12.06□□□□□ -0.48
Cml3Q9JIY8 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cml3Q9JIY8 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cml3Q9JIY8 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cml3Q9JIY8 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
Cml3Q9JIY8 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms