Protein–RNA interactions for Protein: Q9JIL2

Ccl28, C-C motif chemokine 28, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl28Q9JIL2 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccl28Q9JIL2 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccl28Q9JIL2 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccl28Q9JIL2 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Ccl28Q9JIL2 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccl28Q9JIL2 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccl28Q9JIL2 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccl28Q9JIL2 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccl28Q9JIL2 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccl28Q9JIL2 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Ccl28Q9JIL2 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccl28Q9JIL2 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccl28Q9JIL2 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccl28Q9JIL2 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccl28Q9JIL2 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Ccl28Q9JIL2 Gm11355-201ENSMUST00000121120 306 ntBASIC12.79□□□□□ -0.36
Ccl28Q9JIL2 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC12.79□□□□□ -0.36
Ccl28Q9JIL2 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Ccl28Q9JIL2 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccl28Q9JIL2 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccl28Q9JIL2 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccl28Q9JIL2 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Ccl28Q9JIL2 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Ccl28Q9JIL2 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccl28Q9JIL2 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccl28Q9JIL2 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccl28Q9JIL2 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccl28Q9JIL2 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccl28Q9JIL2 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccl28Q9JIL2 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccl28Q9JIL2 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccl28Q9JIL2 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccl28Q9JIL2 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccl28Q9JIL2 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccl28Q9JIL2 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccl28Q9JIL2 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Ccl28Q9JIL2 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccl28Q9JIL2 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccl28Q9JIL2 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Ccl28Q9JIL2 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccl28Q9JIL2 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccl28Q9JIL2 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccl28Q9JIL2 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccl28Q9JIL2 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccl28Q9JIL2 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
Ccl28Q9JIL2 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccl28Q9JIL2 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ccl28Q9JIL2 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC12.78□□□□□ -0.36
Ccl28Q9JIL2 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ccl28Q9JIL2 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccl28Q9JIL2 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccl28Q9JIL2 Gm9987-201ENSMUST00000069768 567 ntBASIC12.78□□□□□ -0.36
Ccl28Q9JIL2 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Ccl28Q9JIL2 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ccl28Q9JIL2 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC12.78□□□□□ -0.36
Ccl28Q9JIL2 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccl28Q9JIL2 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccl28Q9JIL2 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ccl28Q9JIL2 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccl28Q9JIL2 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Ccl28Q9JIL2 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccl28Q9JIL2 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Ccl28Q9JIL2 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccl28Q9JIL2 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccl28Q9JIL2 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccl28Q9JIL2 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Ccl28Q9JIL2 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.36
Ccl28Q9JIL2 Gm9889-202ENSMUST00000206983 1577 ntBASIC12.77□□□□□ -0.36
Ccl28Q9JIL2 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ccl28Q9JIL2 Gm45605-201ENSMUST00000210265 4269 ntBASIC12.77□□□□□ -0.36
Ccl28Q9JIL2 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC12.77□□□□□ -0.36
Ccl28Q9JIL2 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Ccl28Q9JIL2 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ccl28Q9JIL2 AC132265.1-201ENSMUST00000219233 1665 ntBASIC12.77□□□□□ -0.36
Ccl28Q9JIL2 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ccl28Q9JIL2 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
Ccl28Q9JIL2 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ccl28Q9JIL2 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.36
Ccl28Q9JIL2 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccl28Q9JIL2 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccl28Q9JIL2 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC12.77□□□□□ -0.37
Ccl28Q9JIL2 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Ccl28Q9JIL2 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ccl28Q9JIL2 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC12.77□□□□□ -0.37
Ccl28Q9JIL2 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Ccl28Q9JIL2 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccl28Q9JIL2 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Ccl28Q9JIL2 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccl28Q9JIL2 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Ccl28Q9JIL2 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccl28Q9JIL2 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC12.77□□□□□ -0.37
Ccl28Q9JIL2 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Ccl28Q9JIL2 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ccl28Q9JIL2 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ccl28Q9JIL2 Gm6858-201ENSMUST00000208582 1468 ntBASIC12.77□□□□□ -0.37
Ccl28Q9JIL2 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccl28Q9JIL2 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccl28Q9JIL2 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccl28Q9JIL2 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccl28Q9JIL2 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms