Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC15.69■□□□□ 0.1
Tubb3Q9ERD7 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tubb3Q9ERD7 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tubb3Q9ERD7 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Tubb3Q9ERD7 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tubb3Q9ERD7 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tubb3Q9ERD7 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC15.68■□□□□ 0.1
Tubb3Q9ERD7 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Tubb3Q9ERD7 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tubb3Q9ERD7 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC15.68■□□□□ 0.1
Tubb3Q9ERD7 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tubb3Q9ERD7 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tubb3Q9ERD7 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tubb3Q9ERD7 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tubb3Q9ERD7 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tubb3Q9ERD7 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Tubb3Q9ERD7 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Tubb3Q9ERD7 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Tubb3Q9ERD7 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC15.68■□□□□ 0.1
Tubb3Q9ERD7 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Tubb3Q9ERD7 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Tubb3Q9ERD7 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Tubb3Q9ERD7 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tubb3Q9ERD7 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Tubb3Q9ERD7 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC15.68■□□□□ 0.1
Tubb3Q9ERD7 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tubb3Q9ERD7 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Tubb3Q9ERD7 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Tubb3Q9ERD7 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
Tubb3Q9ERD7 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
Tubb3Q9ERD7 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tubb3Q9ERD7 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tubb3Q9ERD7 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tubb3Q9ERD7 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tubb3Q9ERD7 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Tubb3Q9ERD7 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Tubb3Q9ERD7 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Tubb3Q9ERD7 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Tubb3Q9ERD7 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tubb3Q9ERD7 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tubb3Q9ERD7 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC15.67■□□□□ 0.1
Tubb3Q9ERD7 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
Tubb3Q9ERD7 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC15.67■□□□□ 0.1
Tubb3Q9ERD7 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tubb3Q9ERD7 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tubb3Q9ERD7 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tubb3Q9ERD7 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC15.67■□□□□ 0.1
Tubb3Q9ERD7 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
Tubb3Q9ERD7 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Tubb3Q9ERD7 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Tubb3Q9ERD7 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tubb3Q9ERD7 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Tubb3Q9ERD7 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC15.67■□□□□ 0.1
Tubb3Q9ERD7 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Tubb3Q9ERD7 Gm32996-201ENSMUST00000199828 1447 ntBASIC15.67■□□□□ 0.1
Tubb3Q9ERD7 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Tubb3Q9ERD7 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tubb3Q9ERD7 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC15.67■□□□□ 0.1
Tubb3Q9ERD7 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tubb3Q9ERD7 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Tubb3Q9ERD7 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC15.66■□□□□ 0.1
Tubb3Q9ERD7 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Tubb3Q9ERD7 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Tubb3Q9ERD7 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tubb3Q9ERD7 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tubb3Q9ERD7 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Tubb3Q9ERD7 Gm24589-201ENSMUST00000116692 94 ntBASIC15.66■□□□□ 0.1
Tubb3Q9ERD7 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC15.66■□□□□ 0.1
Tubb3Q9ERD7 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tubb3Q9ERD7 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tubb3Q9ERD7 Gm7461-201ENSMUST00000058918 827 ntBASIC15.66■□□□□ 0.1
Tubb3Q9ERD7 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC15.66■□□□□ 0.1
Tubb3Q9ERD7 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tubb3Q9ERD7 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tubb3Q9ERD7 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tubb3Q9ERD7 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC15.66■□□□□ 0.1
Tubb3Q9ERD7 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Tubb3Q9ERD7 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tubb3Q9ERD7 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tubb3Q9ERD7 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tubb3Q9ERD7 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tubb3Q9ERD7 Gm37812-201ENSMUST00000195216 2475 ntBASIC15.66■□□□□ 0.1
Tubb3Q9ERD7 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tubb3Q9ERD7 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tubb3Q9ERD7 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
Tubb3Q9ERD7 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tubb3Q9ERD7 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tubb3Q9ERD7 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Tubb3Q9ERD7 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Tubb3Q9ERD7 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC15.65■□□□□ 0.1
Tubb3Q9ERD7 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC15.65■□□□□ 0.1
Tubb3Q9ERD7 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tubb3Q9ERD7 AC124569.2-201ENSMUST00000225998 818 ntBASIC15.65■□□□□ 0.1
Tubb3Q9ERD7 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tubb3Q9ERD7 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tubb3Q9ERD7 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tubb3Q9ERD7 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tubb3Q9ERD7 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tubb3Q9ERD7 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tubb3Q9ERD7 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms