Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cpsf1Q9EPU4 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Cpsf1Q9EPU4 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Cpsf1Q9EPU4 Gm7901-201ENSMUST00000120430 1597 ntBASIC21.63■■□□□ 1.05
Cpsf1Q9EPU4 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cpsf1Q9EPU4 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Cpsf1Q9EPU4 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cpsf1Q9EPU4 Gm11453-201ENSMUST00000117318 1007 ntBASIC21.63■■□□□ 1.05
Cpsf1Q9EPU4 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Cpsf1Q9EPU4 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cpsf1Q9EPU4 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cpsf1Q9EPU4 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Cpsf1Q9EPU4 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Cpsf1Q9EPU4 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cpsf1Q9EPU4 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC21.62■■□□□ 1.05
Cpsf1Q9EPU4 Gm45412-201ENSMUST00000210217 2275 ntBASIC21.62■■□□□ 1.05
Cpsf1Q9EPU4 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cpsf1Q9EPU4 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cpsf1Q9EPU4 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cpsf1Q9EPU4 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cpsf1Q9EPU4 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
Cpsf1Q9EPU4 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Cpsf1Q9EPU4 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC21.62■■□□□ 1.05
Cpsf1Q9EPU4 Gm7556-201ENSMUST00000201178 1084 ntBASIC21.62■■□□□ 1.05
Cpsf1Q9EPU4 Bloc1s5-203ENSMUST00000224902 612 ntBASIC21.62■■□□□ 1.05
Cpsf1Q9EPU4 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Cpsf1Q9EPU4 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC21.61■■□□□ 1.05
Cpsf1Q9EPU4 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cpsf1Q9EPU4 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cpsf1Q9EPU4 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cpsf1Q9EPU4 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cpsf1Q9EPU4 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cpsf1Q9EPU4 Gm45293-201ENSMUST00000209754 1812 ntBASIC21.61■■□□□ 1.05
Cpsf1Q9EPU4 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cpsf1Q9EPU4 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cpsf1Q9EPU4 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cpsf1Q9EPU4 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Cpsf1Q9EPU4 Chchd1-203ENSMUST00000224633 557 ntBASIC21.61■■□□□ 1.05
Cpsf1Q9EPU4 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC21.61■■□□□ 1.05
Cpsf1Q9EPU4 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cpsf1Q9EPU4 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cpsf1Q9EPU4 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cpsf1Q9EPU4 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC21.61■■□□□ 1.05
Cpsf1Q9EPU4 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cpsf1Q9EPU4 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC21.6■■□□□ 1.05
Cpsf1Q9EPU4 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Cpsf1Q9EPU4 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
Cpsf1Q9EPU4 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cpsf1Q9EPU4 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cpsf1Q9EPU4 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cpsf1Q9EPU4 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC21.6■■□□□ 1.05
Cpsf1Q9EPU4 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC21.6■■□□□ 1.05
Cpsf1Q9EPU4 Gm10499-201ENSMUST00000174094 934 ntBASIC21.6■■□□□ 1.05
Cpsf1Q9EPU4 Gm5177-201ENSMUST00000183092 997 ntBASIC21.6■■□□□ 1.05
Cpsf1Q9EPU4 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC21.6■■□□□ 1.05
Cpsf1Q9EPU4 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Cpsf1Q9EPU4 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cpsf1Q9EPU4 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cpsf1Q9EPU4 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cpsf1Q9EPU4 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cpsf1Q9EPU4 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cpsf1Q9EPU4 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cpsf1Q9EPU4 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cpsf1Q9EPU4 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cpsf1Q9EPU4 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cpsf1Q9EPU4 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Cpsf1Q9EPU4 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cpsf1Q9EPU4 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC21.59■■□□□ 1.05
Cpsf1Q9EPU4 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC21.59■■□□□ 1.05
Cpsf1Q9EPU4 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cpsf1Q9EPU4 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Cpsf1Q9EPU4 AC154572.2-201ENSMUST00000225105 997 ntBASIC21.59■■□□□ 1.05
Cpsf1Q9EPU4 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC21.59■■□□□ 1.05
Cpsf1Q9EPU4 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC21.59■■□□□ 1.05
Cpsf1Q9EPU4 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Cpsf1Q9EPU4 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cpsf1Q9EPU4 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Cpsf1Q9EPU4 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cpsf1Q9EPU4 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
Cpsf1Q9EPU4 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cpsf1Q9EPU4 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC21.58■■□□□ 1.05
Cpsf1Q9EPU4 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cpsf1Q9EPU4 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cpsf1Q9EPU4 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
Cpsf1Q9EPU4 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC21.58■■□□□ 1.04
Cpsf1Q9EPU4 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Cpsf1Q9EPU4 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Cpsf1Q9EPU4 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Cpsf1Q9EPU4 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Cpsf1Q9EPU4 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Cpsf1Q9EPU4 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC21.58■■□□□ 1.04
Cpsf1Q9EPU4 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Cpsf1Q9EPU4 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cpsf1Q9EPU4 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cpsf1Q9EPU4 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Cpsf1Q9EPU4 AC151286.1-201ENSMUST00000198489 145 ntBASIC21.57■■□□□ 1.04
Cpsf1Q9EPU4 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cpsf1Q9EPU4 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cpsf1Q9EPU4 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC21.57■■□□□ 1.04
Cpsf1Q9EPU4 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms