Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rrp8Q9DB85 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rrp8Q9DB85 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rrp8Q9DB85 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rrp8Q9DB85 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rrp8Q9DB85 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rrp8Q9DB85 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rrp8Q9DB85 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC15.41■□□□□ 0.06
Rrp8Q9DB85 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rrp8Q9DB85 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rrp8Q9DB85 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rrp8Q9DB85 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rrp8Q9DB85 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
Rrp8Q9DB85 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC15.41■□□□□ 0.06
Rrp8Q9DB85 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
Rrp8Q9DB85 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rrp8Q9DB85 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC15.41■□□□□ 0.06
Rrp8Q9DB85 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC15.41■□□□□ 0.06
Rrp8Q9DB85 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC15.41■□□□□ 0.06
Rrp8Q9DB85 AC159295.1-201ENSMUST00000225326 940 ntBASIC15.41■□□□□ 0.06
Rrp8Q9DB85 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rrp8Q9DB85 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC15.41■□□□□ 0.06
Rrp8Q9DB85 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rrp8Q9DB85 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rrp8Q9DB85 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rrp8Q9DB85 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rrp8Q9DB85 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
Rrp8Q9DB85 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rrp8Q9DB85 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rrp8Q9DB85 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rrp8Q9DB85 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rrp8Q9DB85 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rrp8Q9DB85 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rrp8Q9DB85 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Rrp8Q9DB85 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rrp8Q9DB85 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC15.4■□□□□ 0.06
Rrp8Q9DB85 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC15.4■□□□□ 0.06
Rrp8Q9DB85 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rrp8Q9DB85 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Rrp8Q9DB85 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Rrp8Q9DB85 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rrp8Q9DB85 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Rrp8Q9DB85 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rrp8Q9DB85 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rrp8Q9DB85 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rrp8Q9DB85 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rrp8Q9DB85 Gm6257-201ENSMUST00000163864 910 ntBASIC15.4■□□□□ 0.06
Rrp8Q9DB85 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rrp8Q9DB85 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rrp8Q9DB85 AC124549.3-201ENSMUST00000225541 367 ntBASIC15.4■□□□□ 0.06
Rrp8Q9DB85 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Rrp8Q9DB85 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC15.4■□□□□ 0.06
Rrp8Q9DB85 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rrp8Q9DB85 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rrp8Q9DB85 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Rrp8Q9DB85 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rrp8Q9DB85 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Rrp8Q9DB85 Best4-ps-201ENSMUST00000129783 1380 ntBASIC15.39■□□□□ 0.05
Rrp8Q9DB85 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rrp8Q9DB85 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC15.39■□□□□ 0.05
Rrp8Q9DB85 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rrp8Q9DB85 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rrp8Q9DB85 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC15.39■□□□□ 0.05
Rrp8Q9DB85 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rrp8Q9DB85 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC15.39■□□□□ 0.05
Rrp8Q9DB85 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rrp8Q9DB85 AC147366.1-201ENSMUST00000227671 852 ntBASIC15.39■□□□□ 0.05
Rrp8Q9DB85 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rrp8Q9DB85 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Rrp8Q9DB85 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC15.39■□□□□ 0.05
Rrp8Q9DB85 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rrp8Q9DB85 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rrp8Q9DB85 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Rrp8Q9DB85 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rrp8Q9DB85 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC15.39■□□□□ 0.05
Rrp8Q9DB85 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rrp8Q9DB85 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC15.39■□□□□ 0.05
Rrp8Q9DB85 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
Rrp8Q9DB85 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rrp8Q9DB85 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rrp8Q9DB85 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rrp8Q9DB85 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC15.38■□□□□ 0.05
Rrp8Q9DB85 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
Rrp8Q9DB85 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rrp8Q9DB85 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rrp8Q9DB85 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Rrp8Q9DB85 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rrp8Q9DB85 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Rrp8Q9DB85 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Rrp8Q9DB85 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Rrp8Q9DB85 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Rrp8Q9DB85 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Rrp8Q9DB85 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC15.38■□□□□ 0.05
Rrp8Q9DB85 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC15.38■□□□□ 0.05
Rrp8Q9DB85 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rrp8Q9DB85 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC15.38■□□□□ 0.05
Rrp8Q9DB85 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rrp8Q9DB85 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rrp8Q9DB85 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rrp8Q9DB85 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 104 ms