Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
U2af1Q9D883 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
U2af1Q9D883 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC20.73■□□□□ 0.91
U2af1Q9D883 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
U2af1Q9D883 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
U2af1Q9D883 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
U2af1Q9D883 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
U2af1Q9D883 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
U2af1Q9D883 Gm8344-201ENSMUST00000119813 856 ntBASIC20.72■□□□□ 0.91
U2af1Q9D883 Gm12350-201ENSMUST00000121208 462 ntBASIC20.72■□□□□ 0.91
U2af1Q9D883 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
U2af1Q9D883 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC20.72■□□□□ 0.91
U2af1Q9D883 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
U2af1Q9D883 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
U2af1Q9D883 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC20.72■□□□□ 0.91
U2af1Q9D883 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
U2af1Q9D883 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC20.72■□□□□ 0.91
U2af1Q9D883 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
U2af1Q9D883 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
U2af1Q9D883 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC20.72■□□□□ 0.91
U2af1Q9D883 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
U2af1Q9D883 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
U2af1Q9D883 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
U2af1Q9D883 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
U2af1Q9D883 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
U2af1Q9D883 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
U2af1Q9D883 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
U2af1Q9D883 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
U2af1Q9D883 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
U2af1Q9D883 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
U2af1Q9D883 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
U2af1Q9D883 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
U2af1Q9D883 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC20.71■□□□□ 0.91
U2af1Q9D883 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC20.71■□□□□ 0.91
U2af1Q9D883 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
U2af1Q9D883 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
U2af1Q9D883 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC20.71■□□□□ 0.91
U2af1Q9D883 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
U2af1Q9D883 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
U2af1Q9D883 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
U2af1Q9D883 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
U2af1Q9D883 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
U2af1Q9D883 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
U2af1Q9D883 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
U2af1Q9D883 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
U2af1Q9D883 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
U2af1Q9D883 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
U2af1Q9D883 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
U2af1Q9D883 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
U2af1Q9D883 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
U2af1Q9D883 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
U2af1Q9D883 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
U2af1Q9D883 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
U2af1Q9D883 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
U2af1Q9D883 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC20.7■□□□□ 0.9
U2af1Q9D883 Mir5126-201ENSMUST00000175513 77 ntBASIC20.7■□□□□ 0.9
U2af1Q9D883 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
U2af1Q9D883 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
U2af1Q9D883 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
U2af1Q9D883 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
U2af1Q9D883 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
U2af1Q9D883 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
U2af1Q9D883 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
U2af1Q9D883 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
U2af1Q9D883 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC20.69■□□□□ 0.9
U2af1Q9D883 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
U2af1Q9D883 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
U2af1Q9D883 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
U2af1Q9D883 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
U2af1Q9D883 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
U2af1Q9D883 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
U2af1Q9D883 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
U2af1Q9D883 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
U2af1Q9D883 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC20.69■□□□□ 0.9
U2af1Q9D883 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
U2af1Q9D883 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC20.69■□□□□ 0.9
U2af1Q9D883 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
U2af1Q9D883 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
U2af1Q9D883 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
U2af1Q9D883 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC20.69■□□□□ 0.9
U2af1Q9D883 Gm19430-201ENSMUST00000193847 2137 ntBASIC20.69■□□□□ 0.9
U2af1Q9D883 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
U2af1Q9D883 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
U2af1Q9D883 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
U2af1Q9D883 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC20.68■□□□□ 0.9
U2af1Q9D883 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC20.68■□□□□ 0.9
U2af1Q9D883 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
U2af1Q9D883 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
U2af1Q9D883 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
U2af1Q9D883 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
U2af1Q9D883 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
U2af1Q9D883 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
U2af1Q9D883 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
U2af1Q9D883 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
U2af1Q9D883 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC20.68■□□□□ 0.9
U2af1Q9D883 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
U2af1Q9D883 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
U2af1Q9D883 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC20.68■□□□□ 0.9
U2af1Q9D883 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
U2af1Q9D883 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC20.68■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms