Protein–RNA interactions for Protein: Q9D7H3

RtcA, RNA 3'-terminal phosphate cyclase, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcAQ9D7H3 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
RtcAQ9D7H3 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RtcAQ9D7H3 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
RtcAQ9D7H3 Gm13884-201ENSMUST00000118103 829 ntBASIC15.39■□□□□ 0.05
RtcAQ9D7H3 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC15.39■□□□□ 0.05
RtcAQ9D7H3 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC15.39■□□□□ 0.05
RtcAQ9D7H3 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RtcAQ9D7H3 Gm18622-201ENSMUST00000219361 595 ntBASIC15.39■□□□□ 0.05
RtcAQ9D7H3 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
RtcAQ9D7H3 Gm8655-201ENSMUST00000221159 852 ntBASIC15.39■□□□□ 0.05
RtcAQ9D7H3 Rbfox2-207ENSMUST00000227533 1041 ntBASIC15.39■□□□□ 0.05
RtcAQ9D7H3 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RtcAQ9D7H3 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RtcAQ9D7H3 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC15.39■□□□□ 0.05
RtcAQ9D7H3 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RtcAQ9D7H3 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RtcAQ9D7H3 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RtcAQ9D7H3 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RtcAQ9D7H3 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RtcAQ9D7H3 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RtcAQ9D7H3 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RtcAQ9D7H3 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RtcAQ9D7H3 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RtcAQ9D7H3 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
RtcAQ9D7H3 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RtcAQ9D7H3 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC15.38■□□□□ 0.05
RtcAQ9D7H3 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RtcAQ9D7H3 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RtcAQ9D7H3 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
RtcAQ9D7H3 Mir8098-201ENSMUST00000184011 137 ntBASIC15.38■□□□□ 0.05
RtcAQ9D7H3 Gm28659-201ENSMUST00000188013 759 ntBASIC15.38■□□□□ 0.05
RtcAQ9D7H3 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC15.38■□□□□ 0.05
RtcAQ9D7H3 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC15.38■□□□□ 0.05
RtcAQ9D7H3 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RtcAQ9D7H3 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RtcAQ9D7H3 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RtcAQ9D7H3 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC15.38■□□□□ 0.05
RtcAQ9D7H3 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
RtcAQ9D7H3 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
RtcAQ9D7H3 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RtcAQ9D7H3 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RtcAQ9D7H3 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RtcAQ9D7H3 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RtcAQ9D7H3 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RtcAQ9D7H3 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RtcAQ9D7H3 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RtcAQ9D7H3 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RtcAQ9D7H3 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RtcAQ9D7H3 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC15.37■□□□□ 0.05
RtcAQ9D7H3 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
RtcAQ9D7H3 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RtcAQ9D7H3 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RtcAQ9D7H3 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RtcAQ9D7H3 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.37■□□□□ 0.05
RtcAQ9D7H3 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
RtcAQ9D7H3 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
RtcAQ9D7H3 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
RtcAQ9D7H3 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
RtcAQ9D7H3 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RtcAQ9D7H3 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC15.37■□□□□ 0.05
RtcAQ9D7H3 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RtcAQ9D7H3 Gm6376-201ENSMUST00000209407 580 ntBASIC15.37■□□□□ 0.05
RtcAQ9D7H3 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC15.37■□□□□ 0.05
RtcAQ9D7H3 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RtcAQ9D7H3 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RtcAQ9D7H3 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RtcAQ9D7H3 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
RtcAQ9D7H3 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RtcAQ9D7H3 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
RtcAQ9D7H3 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RtcAQ9D7H3 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RtcAQ9D7H3 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RtcAQ9D7H3 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RtcAQ9D7H3 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
RtcAQ9D7H3 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
RtcAQ9D7H3 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
RtcAQ9D7H3 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RtcAQ9D7H3 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RtcAQ9D7H3 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RtcAQ9D7H3 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RtcAQ9D7H3 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RtcAQ9D7H3 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RtcAQ9D7H3 Grk6-207ENSMUST00000225925 2769 ntBASIC15.36■□□□□ 0.05
RtcAQ9D7H3 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC15.36■□□□□ 0.05
RtcAQ9D7H3 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
RtcAQ9D7H3 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RtcAQ9D7H3 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
RtcAQ9D7H3 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RtcAQ9D7H3 Gm13418-201ENSMUST00000119097 944 ntBASIC15.36■□□□□ 0.05
RtcAQ9D7H3 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RtcAQ9D7H3 Gm37584-201ENSMUST00000193595 1290 ntBASIC15.36■□□□□ 0.05
RtcAQ9D7H3 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
RtcAQ9D7H3 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RtcAQ9D7H3 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RtcAQ9D7H3 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
RtcAQ9D7H3 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RtcAQ9D7H3 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
RtcAQ9D7H3 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RtcAQ9D7H3 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
RtcAQ9D7H3 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms