Protein–RNA interactions for Protein: Q9D439

Cfap53, Cilia- and flagella-associated protein 53, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap53Q9D439 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Cfap53Q9D439 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cfap53Q9D439 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cfap53Q9D439 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cfap53Q9D439 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cfap53Q9D439 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.37
Cfap53Q9D439 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
Cfap53Q9D439 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC17.33■□□□□ 0.36
Cfap53Q9D439 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cfap53Q9D439 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cfap53Q9D439 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC17.33■□□□□ 0.36
Cfap53Q9D439 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cfap53Q9D439 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Cfap53Q9D439 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Cfap53Q9D439 Mir3081-201ENSMUST00000175305 84 ntBASIC17.33■□□□□ 0.36
Cfap53Q9D439 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cfap53Q9D439 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cfap53Q9D439 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC17.33■□□□□ 0.36
Cfap53Q9D439 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cfap53Q9D439 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cfap53Q9D439 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Cfap53Q9D439 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cfap53Q9D439 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Cfap53Q9D439 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cfap53Q9D439 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cfap53Q9D439 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Cfap53Q9D439 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cfap53Q9D439 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cfap53Q9D439 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cfap53Q9D439 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cfap53Q9D439 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Cfap53Q9D439 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cfap53Q9D439 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cfap53Q9D439 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cfap53Q9D439 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC17.32■□□□□ 0.36
Cfap53Q9D439 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cfap53Q9D439 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cfap53Q9D439 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Cfap53Q9D439 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cfap53Q9D439 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC17.32■□□□□ 0.36
Cfap53Q9D439 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cfap53Q9D439 Gm1818-201ENSMUST00000169406 1184 ntBASIC17.32■□□□□ 0.36
Cfap53Q9D439 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cfap53Q9D439 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Cfap53Q9D439 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cfap53Q9D439 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cfap53Q9D439 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cfap53Q9D439 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cfap53Q9D439 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cfap53Q9D439 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
Cfap53Q9D439 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cfap53Q9D439 Gm44729-201ENSMUST00000206759 2052 ntBASIC17.32■□□□□ 0.36
Cfap53Q9D439 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cfap53Q9D439 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cfap53Q9D439 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC17.31■□□□□ 0.36
Cfap53Q9D439 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Cfap53Q9D439 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cfap53Q9D439 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cfap53Q9D439 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cfap53Q9D439 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cfap53Q9D439 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cfap53Q9D439 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cfap53Q9D439 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cfap53Q9D439 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cfap53Q9D439 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cfap53Q9D439 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Cfap53Q9D439 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cfap53Q9D439 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cfap53Q9D439 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Cfap53Q9D439 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cfap53Q9D439 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cfap53Q9D439 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cfap53Q9D439 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cfap53Q9D439 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cfap53Q9D439 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cfap53Q9D439 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cfap53Q9D439 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cfap53Q9D439 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cfap53Q9D439 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cfap53Q9D439 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cfap53Q9D439 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cfap53Q9D439 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cfap53Q9D439 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cfap53Q9D439 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Cfap53Q9D439 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC17.3■□□□□ 0.36
Cfap53Q9D439 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cfap53Q9D439 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cfap53Q9D439 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cfap53Q9D439 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC17.3■□□□□ 0.36
Cfap53Q9D439 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cfap53Q9D439 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cfap53Q9D439 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cfap53Q9D439 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cfap53Q9D439 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cfap53Q9D439 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cfap53Q9D439 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cfap53Q9D439 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cfap53Q9D439 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cfap53Q9D439 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cfap53Q9D439 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms