Protein–RNA interactions for Protein: Q9D0N8

Tmem88, Transmembrane protein 88, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem88Q9D0N8 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tmem88Q9D0N8 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Tmem88Q9D0N8 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tmem88Q9D0N8 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tmem88Q9D0N8 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tmem88Q9D0N8 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tmem88Q9D0N8 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC12.54□□□□□ -0.4
Tmem88Q9D0N8 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tmem88Q9D0N8 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Tmem88Q9D0N8 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC12.54□□□□□ -0.4
Tmem88Q9D0N8 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tmem88Q9D0N8 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.54□□□□□ -0.4
Tmem88Q9D0N8 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tmem88Q9D0N8 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tmem88Q9D0N8 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tmem88Q9D0N8 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC12.53□□□□□ -0.4
Tmem88Q9D0N8 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tmem88Q9D0N8 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tmem88Q9D0N8 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC12.53□□□□□ -0.4
Tmem88Q9D0N8 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Tmem88Q9D0N8 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tmem88Q9D0N8 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tmem88Q9D0N8 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tmem88Q9D0N8 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tmem88Q9D0N8 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tmem88Q9D0N8 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tmem88Q9D0N8 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Tmem88Q9D0N8 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC12.53□□□□□ -0.4
Tmem88Q9D0N8 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tmem88Q9D0N8 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Tmem88Q9D0N8 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
Tmem88Q9D0N8 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Tmem88Q9D0N8 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tmem88Q9D0N8 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tmem88Q9D0N8 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Tmem88Q9D0N8 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Tmem88Q9D0N8 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tmem88Q9D0N8 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Tmem88Q9D0N8 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tmem88Q9D0N8 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tmem88Q9D0N8 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC12.53□□□□□ -0.4
Tmem88Q9D0N8 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Tmem88Q9D0N8 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tmem88Q9D0N8 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tmem88Q9D0N8 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Tmem88Q9D0N8 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tmem88Q9D0N8 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Tmem88Q9D0N8 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tmem88Q9D0N8 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tmem88Q9D0N8 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tmem88Q9D0N8 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
Tmem88Q9D0N8 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tmem88Q9D0N8 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Tmem88Q9D0N8 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tmem88Q9D0N8 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tmem88Q9D0N8 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tmem88Q9D0N8 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tmem88Q9D0N8 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tmem88Q9D0N8 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tmem88Q9D0N8 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Tmem88Q9D0N8 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Tmem88Q9D0N8 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tmem88Q9D0N8 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tmem88Q9D0N8 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tmem88Q9D0N8 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
Tmem88Q9D0N8 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tmem88Q9D0N8 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Tmem88Q9D0N8 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tmem88Q9D0N8 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tmem88Q9D0N8 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Tmem88Q9D0N8 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tmem88Q9D0N8 Gm3807-201ENSMUST00000193520 1168 ntBASIC12.52□□□□□ -0.41
Tmem88Q9D0N8 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC12.52□□□□□ -0.41
Tmem88Q9D0N8 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Tmem88Q9D0N8 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Tmem88Q9D0N8 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tmem88Q9D0N8 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Tmem88Q9D0N8 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tmem88Q9D0N8 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC12.52□□□□□ -0.41
Tmem88Q9D0N8 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tmem88Q9D0N8 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tmem88Q9D0N8 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tmem88Q9D0N8 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Tmem88Q9D0N8 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tmem88Q9D0N8 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tmem88Q9D0N8 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Tmem88Q9D0N8 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tmem88Q9D0N8 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tmem88Q9D0N8 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tmem88Q9D0N8 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Tmem88Q9D0N8 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Tmem88Q9D0N8 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Tmem88Q9D0N8 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tmem88Q9D0N8 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tmem88Q9D0N8 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tmem88Q9D0N8 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Tmem88Q9D0N8 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Tmem88Q9D0N8 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Tmem88Q9D0N8 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Tmem88Q9D0N8 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms