Protein–RNA interactions for Protein: Q9D032

Ssbp3, Single-stranded DNA-binding protein 3, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp3Q9D032 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ssbp3Q9D032 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ssbp3Q9D032 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ssbp3Q9D032 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ssbp3Q9D032 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC13.15□□□□□ -0.3
Ssbp3Q9D032 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ssbp3Q9D032 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ssbp3Q9D032 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ssbp3Q9D032 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ssbp3Q9D032 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ssbp3Q9D032 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ssbp3Q9D032 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Ssbp3Q9D032 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Ssbp3Q9D032 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Ssbp3Q9D032 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ssbp3Q9D032 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ssbp3Q9D032 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Ssbp3Q9D032 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC13.14□□□□□ -0.31
Ssbp3Q9D032 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Ssbp3Q9D032 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC13.14□□□□□ -0.31
Ssbp3Q9D032 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Ssbp3Q9D032 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC13.14□□□□□ -0.31
Ssbp3Q9D032 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC13.14□□□□□ -0.31
Ssbp3Q9D032 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC13.14□□□□□ -0.31
Ssbp3Q9D032 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC13.14□□□□□ -0.31
Ssbp3Q9D032 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ssbp3Q9D032 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ssbp3Q9D032 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ssbp3Q9D032 Gm18856-201ENSMUST00000178096 1374 ntBASIC13.14□□□□□ -0.31
Ssbp3Q9D032 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC13.14□□□□□ -0.31
Ssbp3Q9D032 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ssbp3Q9D032 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ssbp3Q9D032 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ssbp3Q9D032 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Ssbp3Q9D032 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ssbp3Q9D032 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ssbp3Q9D032 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ssbp3Q9D032 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ssbp3Q9D032 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ssbp3Q9D032 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ssbp3Q9D032 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Ssbp3Q9D032 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Ssbp3Q9D032 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Ssbp3Q9D032 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ssbp3Q9D032 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC13.13□□□□□ -0.31
Ssbp3Q9D032 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ssbp3Q9D032 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ssbp3Q9D032 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ssbp3Q9D032 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
Ssbp3Q9D032 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ssbp3Q9D032 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ssbp3Q9D032 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ssbp3Q9D032 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ssbp3Q9D032 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ssbp3Q9D032 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ssbp3Q9D032 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ssbp3Q9D032 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ssbp3Q9D032 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ssbp3Q9D032 Gm4459-201ENSMUST00000118750 468 ntBASIC13.13□□□□□ -0.31
Ssbp3Q9D032 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ssbp3Q9D032 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ssbp3Q9D032 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ssbp3Q9D032 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ssbp3Q9D032 Gm44357-201ENSMUST00000195897 142 ntBASIC13.13□□□□□ -0.31
Ssbp3Q9D032 Gm19658-201ENSMUST00000196231 138 ntBASIC13.13□□□□□ -0.31
Ssbp3Q9D032 Gm44367-201ENSMUST00000196836 138 ntBASIC13.13□□□□□ -0.31
Ssbp3Q9D032 Gm44350-201ENSMUST00000197197 138 ntBASIC13.13□□□□□ -0.31
Ssbp3Q9D032 Gm44390-201ENSMUST00000197533 144 ntBASIC13.13□□□□□ -0.31
Ssbp3Q9D032 Gm44313-201ENSMUST00000198018 138 ntBASIC13.13□□□□□ -0.31
Ssbp3Q9D032 Gm44486-201ENSMUST00000198508 138 ntBASIC13.13□□□□□ -0.31
Ssbp3Q9D032 Gm44314-201ENSMUST00000199263 138 ntBASIC13.13□□□□□ -0.31
Ssbp3Q9D032 Gm44394-201ENSMUST00000199558 138 ntBASIC13.13□□□□□ -0.31
Ssbp3Q9D032 Gm44484-201ENSMUST00000199873 138 ntBASIC13.13□□□□□ -0.31
Ssbp3Q9D032 Gm44466-201ENSMUST00000200264 138 ntBASIC13.13□□□□□ -0.31
Ssbp3Q9D032 Gm44359-201ENSMUST00000200671 138 ntBASIC13.13□□□□□ -0.31
Ssbp3Q9D032 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Ssbp3Q9D032 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC13.13□□□□□ -0.31
Ssbp3Q9D032 AC161829.1-201ENSMUST00000220298 281 ntBASIC13.13□□□□□ -0.31
Ssbp3Q9D032 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ssbp3Q9D032 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ssbp3Q9D032 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ssbp3Q9D032 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ssbp3Q9D032 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Ssbp3Q9D032 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Ssbp3Q9D032 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ssbp3Q9D032 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ssbp3Q9D032 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Ssbp3Q9D032 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ssbp3Q9D032 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ssbp3Q9D032 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ssbp3Q9D032 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ssbp3Q9D032 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ssbp3Q9D032 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Ssbp3Q9D032 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ssbp3Q9D032 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ssbp3Q9D032 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ssbp3Q9D032 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ssbp3Q9D032 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ssbp3Q9D032 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ssbp3Q9D032 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms