Protein–RNA interactions for Protein: Q9CYI0

Protein Njmu-R1, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CYI0 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Q9CYI0 Gm15590-201ENSMUST00000078419 552 ntBASIC17.4■□□□□ 0.38
Q9CYI0 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Q9CYI0 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Q9CYI0 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Q9CYI0 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Q9CYI0 Gm3928-201ENSMUST00000121141 1307 ntBASIC17.4■□□□□ 0.38
Q9CYI0 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Q9CYI0 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Q9CYI0 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Q9CYI0 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Q9CYI0 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Q9CYI0 Gm37500-201ENSMUST00000192059 1443 ntBASIC17.39■□□□□ 0.38
Q9CYI0 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Q9CYI0 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Q9CYI0 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Q9CYI0 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Q9CYI0 Gm4609-201ENSMUST00000106443 1002 ntBASIC17.39■□□□□ 0.37
Q9CYI0 Gm5138-201ENSMUST00000113842 1002 ntBASIC17.39■□□□□ 0.37
Q9CYI0 Gm15191-201ENSMUST00000117933 1000 ntBASIC17.39■□□□□ 0.37
Q9CYI0 Gm12182-201ENSMUST00000118655 1008 ntBASIC17.39■□□□□ 0.37
Q9CYI0 Gm13882-201ENSMUST00000120886 1002 ntBASIC17.39■□□□□ 0.37
Q9CYI0 Gm10284-201ENSMUST00000145057 1005 ntBASIC17.39■□□□□ 0.37
Q9CYI0 Gm10481-201ENSMUST00000179228 1002 ntBASIC17.39■□□□□ 0.37
Q9CYI0 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC17.39■□□□□ 0.37
Q9CYI0 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC17.39■□□□□ 0.37
Q9CYI0 Gm2574-201ENSMUST00000181051 1002 ntBASIC17.39■□□□□ 0.37
Q9CYI0 Gm3200-201ENSMUST00000181493 1002 ntBASIC17.39■□□□□ 0.37
Q9CYI0 Gm8825-201ENSMUST00000182565 998 ntBASIC17.39■□□□□ 0.37
Q9CYI0 Gm4518-201ENSMUST00000182638 718 ntBASIC17.39■□□□□ 0.37
Q9CYI0 Gm8330-201ENSMUST00000182754 1008 ntBASIC17.39■□□□□ 0.37
Q9CYI0 Gm4575-201ENSMUST00000182991 1002 ntBASIC17.39■□□□□ 0.37
Q9CYI0 Gm8709-201ENSMUST00000183230 1012 ntBASIC17.39■□□□□ 0.37
Q9CYI0 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Q9CYI0 Gm37935-201ENSMUST00000192012 982 ntBASIC17.39■□□□□ 0.37
Q9CYI0 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC17.39■□□□□ 0.37
Q9CYI0 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Q9CYI0 Gm10293-201ENSMUST00000076317 1002 ntBASIC17.39■□□□□ 0.37
Q9CYI0 Gm6316-201ENSMUST00000082064 1020 ntBASIC17.39■□□□□ 0.37
Q9CYI0 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Q9CYI0 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC17.39■□□□□ 0.37
Q9CYI0 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Q9CYI0 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Q9CYI0 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Q9CYI0 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Q9CYI0 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Q9CYI0 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Q9CYI0 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Q9CYI0 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Q9CYI0 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Q9CYI0 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Q9CYI0 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Q9CYI0 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Q9CYI0 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Q9CYI0 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC17.38■□□□□ 0.37
Q9CYI0 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Q9CYI0 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Q9CYI0 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Q9CYI0 Gm8000-201ENSMUST00000188378 592 ntBASIC17.38■□□□□ 0.37
Q9CYI0 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC17.38■□□□□ 0.37
Q9CYI0 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Q9CYI0 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC17.38■□□□□ 0.37
Q9CYI0 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Q9CYI0 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Q9CYI0 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Q9CYI0 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Q9CYI0 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Q9CYI0 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Q9CYI0 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Q9CYI0 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Q9CYI0 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Q9CYI0 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Q9CYI0 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Q9CYI0 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Q9CYI0 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Q9CYI0 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Q9CYI0 Gm8784-201ENSMUST00000222096 1435 ntBASIC17.38■□□□□ 0.37
Q9CYI0 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Q9CYI0 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Q9CYI0 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Q9CYI0 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Q9CYI0 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Q9CYI0 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Q9CYI0 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Q9CYI0 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Q9CYI0 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Q9CYI0 Gm7222-201ENSMUST00000117512 906 ntBASIC17.37■□□□□ 0.37
Q9CYI0 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
Q9CYI0 Gm43073-201ENSMUST00000198200 1189 ntBASIC17.37■□□□□ 0.37
Q9CYI0 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Q9CYI0 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Q9CYI0 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC17.37■□□□□ 0.37
Q9CYI0 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Q9CYI0 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC17.37■□□□□ 0.37
Q9CYI0 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Q9CYI0 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Q9CYI0 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Q9CYI0 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Q9CYI0 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Q9CYI0 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms