Protein–RNA interactions for Protein: Q9CYC3

Tmem39a, Transmembrane protein 39A, mousemouse

Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem39aQ9CYC3 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Tmem39aQ9CYC3 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tmem39aQ9CYC3 AC122901.1-201ENSMUST00000214203 1790 ntBASIC17.69■□□□□ 0.42
Tmem39aQ9CYC3 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tmem39aQ9CYC3 Gm4459-201ENSMUST00000118750 468 ntBASIC17.69■□□□□ 0.42
Tmem39aQ9CYC3 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC17.69■□□□□ 0.42
Tmem39aQ9CYC3 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tmem39aQ9CYC3 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Tmem39aQ9CYC3 Gm11780-201ENSMUST00000136880 516 ntBASIC17.69■□□□□ 0.42
Tmem39aQ9CYC3 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC17.69■□□□□ 0.42
Tmem39aQ9CYC3 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Tmem39aQ9CYC3 Gm7507-201ENSMUST00000183053 1008 ntBASIC17.69■□□□□ 0.42
Tmem39aQ9CYC3 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Tmem39aQ9CYC3 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Tmem39aQ9CYC3 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Tmem39aQ9CYC3 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC17.69■□□□□ 0.42
Tmem39aQ9CYC3 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Tmem39aQ9CYC3 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tmem39aQ9CYC3 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC17.69■□□□□ 0.42
Tmem39aQ9CYC3 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tmem39aQ9CYC3 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tmem39aQ9CYC3 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC17.69■□□□□ 0.42
Tmem39aQ9CYC3 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tmem39aQ9CYC3 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tmem39aQ9CYC3 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tmem39aQ9CYC3 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Tmem39aQ9CYC3 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Tmem39aQ9CYC3 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tmem39aQ9CYC3 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Tmem39aQ9CYC3 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Tmem39aQ9CYC3 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC17.68■□□□□ 0.42
Tmem39aQ9CYC3 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tmem39aQ9CYC3 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tmem39aQ9CYC3 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tmem39aQ9CYC3 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Tmem39aQ9CYC3 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Tmem39aQ9CYC3 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Tmem39aQ9CYC3 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC17.68■□□□□ 0.42
Tmem39aQ9CYC3 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tmem39aQ9CYC3 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Tmem39aQ9CYC3 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tmem39aQ9CYC3 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Tmem39aQ9CYC3 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tmem39aQ9CYC3 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Tmem39aQ9CYC3 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tmem39aQ9CYC3 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tmem39aQ9CYC3 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC17.68■□□□□ 0.42
Tmem39aQ9CYC3 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tmem39aQ9CYC3 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tmem39aQ9CYC3 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC17.68■□□□□ 0.42
Tmem39aQ9CYC3 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tmem39aQ9CYC3 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tmem39aQ9CYC3 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tmem39aQ9CYC3 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tmem39aQ9CYC3 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tmem39aQ9CYC3 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Tmem39aQ9CYC3 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tmem39aQ9CYC3 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC17.67■□□□□ 0.42
Tmem39aQ9CYC3 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tmem39aQ9CYC3 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Tmem39aQ9CYC3 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Tmem39aQ9CYC3 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tmem39aQ9CYC3 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tmem39aQ9CYC3 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Tmem39aQ9CYC3 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC17.67■□□□□ 0.42
Tmem39aQ9CYC3 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Tmem39aQ9CYC3 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tmem39aQ9CYC3 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Tmem39aQ9CYC3 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC17.67■□□□□ 0.42
Tmem39aQ9CYC3 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Tmem39aQ9CYC3 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tmem39aQ9CYC3 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tmem39aQ9CYC3 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
Tmem39aQ9CYC3 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC17.66■□□□□ 0.42
Tmem39aQ9CYC3 Gm7222-201ENSMUST00000117512 906 ntBASIC17.66■□□□□ 0.42
Tmem39aQ9CYC3 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC17.66■□□□□ 0.42
Tmem39aQ9CYC3 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Tmem39aQ9CYC3 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Tmem39aQ9CYC3 Gm8655-201ENSMUST00000221159 852 ntBASIC17.66■□□□□ 0.42
Tmem39aQ9CYC3 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC17.66■□□□□ 0.42
Tmem39aQ9CYC3 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Tmem39aQ9CYC3 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tmem39aQ9CYC3 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Tmem39aQ9CYC3 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC17.66■□□□□ 0.42
Tmem39aQ9CYC3 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tmem39aQ9CYC3 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tmem39aQ9CYC3 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tmem39aQ9CYC3 Gm9889-202ENSMUST00000206983 1577 ntBASIC17.66■□□□□ 0.42
Tmem39aQ9CYC3 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Tmem39aQ9CYC3 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tmem39aQ9CYC3 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tmem39aQ9CYC3 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tmem39aQ9CYC3 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC17.65■□□□□ 0.42
Tmem39aQ9CYC3 Gm25911-201ENSMUST00000157621 56 ntBASIC17.65■□□□□ 0.42
Tmem39aQ9CYC3 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
Tmem39aQ9CYC3 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC17.65■□□□□ 0.42
Tmem39aQ9CYC3 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Tmem39aQ9CYC3 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tmem39aQ9CYC3 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tmem39aQ9CYC3 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms