Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cldnd1Q9CQX5 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cldnd1Q9CQX5 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cldnd1Q9CQX5 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Cldnd1Q9CQX5 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cldnd1Q9CQX5 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cldnd1Q9CQX5 Gm22065-201ENSMUST00000103753 110 ntBASIC16.1■□□□□ 0.17
Cldnd1Q9CQX5 Gm22066-201ENSMUST00000103761 110 ntBASIC16.1■□□□□ 0.17
Cldnd1Q9CQX5 Gm24932-201ENSMUST00000103763 110 ntBASIC16.1■□□□□ 0.17
Cldnd1Q9CQX5 Gm24115-201ENSMUST00000103799 110 ntBASIC16.1■□□□□ 0.17
Cldnd1Q9CQX5 Gm22190-201ENSMUST00000103827 110 ntBASIC16.1■□□□□ 0.17
Cldnd1Q9CQX5 Gm22191-201ENSMUST00000103831 110 ntBASIC16.1■□□□□ 0.17
Cldnd1Q9CQX5 Gm24721-201ENSMUST00000103849 110 ntBASIC16.1■□□□□ 0.17
Cldnd1Q9CQX5 Gm28018-201ENSMUST00000103869 110 ntBASIC16.1■□□□□ 0.17
Cldnd1Q9CQX5 Gm26399-201ENSMUST00000103937 110 ntBASIC16.1■□□□□ 0.17
Cldnd1Q9CQX5 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC16.1■□□□□ 0.17
Cldnd1Q9CQX5 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC16.1■□□□□ 0.17
Cldnd1Q9CQX5 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cldnd1Q9CQX5 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cldnd1Q9CQX5 Gm25349-201ENSMUST00000177728 110 ntBASIC16.1■□□□□ 0.17
Cldnd1Q9CQX5 Gm23616-201ENSMUST00000177797 110 ntBASIC16.1■□□□□ 0.17
Cldnd1Q9CQX5 Gm25871-201ENSMUST00000177816 110 ntBASIC16.1■□□□□ 0.17
Cldnd1Q9CQX5 Gm24752-201ENSMUST00000178240 110 ntBASIC16.1■□□□□ 0.17
Cldnd1Q9CQX5 Gm24496-201ENSMUST00000178287 110 ntBASIC16.1■□□□□ 0.17
Cldnd1Q9CQX5 Gm25649-201ENSMUST00000178476 110 ntBASIC16.1■□□□□ 0.17
Cldnd1Q9CQX5 Gm25548-201ENSMUST00000178681 110 ntBASIC16.1■□□□□ 0.17
Cldnd1Q9CQX5 Gm23147-201ENSMUST00000178841 110 ntBASIC16.1■□□□□ 0.17
Cldnd1Q9CQX5 Gm26095-201ENSMUST00000179270 110 ntBASIC16.1■□□□□ 0.17
Cldnd1Q9CQX5 Gm22171-201ENSMUST00000179283 110 ntBASIC16.1■□□□□ 0.17
Cldnd1Q9CQX5 Gm23936-201ENSMUST00000179354 110 ntBASIC16.1■□□□□ 0.17
Cldnd1Q9CQX5 Gm22619-201ENSMUST00000179516 110 ntBASIC16.1■□□□□ 0.17
Cldnd1Q9CQX5 Gm25255-201ENSMUST00000179579 110 ntBASIC16.1■□□□□ 0.17
Cldnd1Q9CQX5 Gm24755-201ENSMUST00000179691 110 ntBASIC16.1■□□□□ 0.17
Cldnd1Q9CQX5 Gm26506-201ENSMUST00000179692 110 ntBASIC16.1■□□□□ 0.17
Cldnd1Q9CQX5 Gm25086-201ENSMUST00000179931 110 ntBASIC16.1■□□□□ 0.17
Cldnd1Q9CQX5 Gm23243-201ENSMUST00000180047 110 ntBASIC16.1■□□□□ 0.17
Cldnd1Q9CQX5 Gm24659-201ENSMUST00000180212 110 ntBASIC16.1■□□□□ 0.17
Cldnd1Q9CQX5 Gm24169-201ENSMUST00000180244 110 ntBASIC16.1■□□□□ 0.17
Cldnd1Q9CQX5 Gm23689-201ENSMUST00000180354 110 ntBASIC16.1■□□□□ 0.17
Cldnd1Q9CQX5 Gm27359-201ENSMUST00000184153 110 ntBASIC16.1■□□□□ 0.17
Cldnd1Q9CQX5 Gm27785-201ENSMUST00000184268 110 ntBASIC16.1■□□□□ 0.17
Cldnd1Q9CQX5 Gm27466-201ENSMUST00000184396 110 ntBASIC16.1■□□□□ 0.17
Cldnd1Q9CQX5 Gm27703-201ENSMUST00000184836 110 ntBASIC16.1■□□□□ 0.17
Cldnd1Q9CQX5 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cldnd1Q9CQX5 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cldnd1Q9CQX5 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cldnd1Q9CQX5 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cldnd1Q9CQX5 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Cldnd1Q9CQX5 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cldnd1Q9CQX5 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cldnd1Q9CQX5 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC16.1■□□□□ 0.17
Cldnd1Q9CQX5 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cldnd1Q9CQX5 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cldnd1Q9CQX5 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.09■□□□□ 0.17
Cldnd1Q9CQX5 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cldnd1Q9CQX5 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Cldnd1Q9CQX5 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC16.09■□□□□ 0.17
Cldnd1Q9CQX5 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Cldnd1Q9CQX5 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cldnd1Q9CQX5 Gm12008-201ENSMUST00000117791 755 ntBASIC16.09■□□□□ 0.17
Cldnd1Q9CQX5 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC16.09■□□□□ 0.17
Cldnd1Q9CQX5 Gm27437-201ENSMUST00000183429 107 ntBASIC16.09■□□□□ 0.17
Cldnd1Q9CQX5 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC16.09■□□□□ 0.17
Cldnd1Q9CQX5 Gm18057-201ENSMUST00000208220 503 ntBASIC16.09■□□□□ 0.17
Cldnd1Q9CQX5 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC16.09■□□□□ 0.17
Cldnd1Q9CQX5 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cldnd1Q9CQX5 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cldnd1Q9CQX5 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cldnd1Q9CQX5 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cldnd1Q9CQX5 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Cldnd1Q9CQX5 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cldnd1Q9CQX5 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC16.09■□□□□ 0.17
Cldnd1Q9CQX5 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cldnd1Q9CQX5 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cldnd1Q9CQX5 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.09■□□□□ 0.17
Cldnd1Q9CQX5 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Cldnd1Q9CQX5 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
Cldnd1Q9CQX5 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Cldnd1Q9CQX5 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Cldnd1Q9CQX5 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Cldnd1Q9CQX5 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Cldnd1Q9CQX5 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Cldnd1Q9CQX5 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Cldnd1Q9CQX5 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.08■□□□□ 0.16
Cldnd1Q9CQX5 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cldnd1Q9CQX5 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Cldnd1Q9CQX5 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cldnd1Q9CQX5 Gm5866-201ENSMUST00000177881 973 ntBASIC16.08■□□□□ 0.16
Cldnd1Q9CQX5 AC125206.2-201ENSMUST00000217454 574 ntBASIC16.08■□□□□ 0.16
Cldnd1Q9CQX5 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cldnd1Q9CQX5 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Cldnd1Q9CQX5 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Cldnd1Q9CQX5 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cldnd1Q9CQX5 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Cldnd1Q9CQX5 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cldnd1Q9CQX5 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cldnd1Q9CQX5 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.08■□□□□ 0.16
Cldnd1Q9CQX5 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.08■□□□□ 0.16
Cldnd1Q9CQX5 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cldnd1Q9CQX5 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms