Protein–RNA interactions for Protein: Q99PV0

Prpf8, Pre-mRNA-processing-splicing factor 8, mousemouse

Known RBP Predictions only

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf8Q99PV0 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Prpf8Q99PV0 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Prpf8Q99PV0 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC12.92□□□□□ -0.34
Prpf8Q99PV0 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Prpf8Q99PV0 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Prpf8Q99PV0 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Prpf8Q99PV0 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Prpf8Q99PV0 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Prpf8Q99PV0 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Prpf8Q99PV0 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Prpf8Q99PV0 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Prpf8Q99PV0 Gm27397-201ENSMUST00000184997 107 ntBASIC12.91□□□□□ -0.34
Prpf8Q99PV0 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Prpf8Q99PV0 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC12.91□□□□□ -0.34
Prpf8Q99PV0 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Prpf8Q99PV0 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Prpf8Q99PV0 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Prpf8Q99PV0 Gm11841-201ENSMUST00000117060 1963 ntBASIC12.91□□□□□ -0.34
Prpf8Q99PV0 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Prpf8Q99PV0 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Prpf8Q99PV0 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Prpf8Q99PV0 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Prpf8Q99PV0 Gm43182-201ENSMUST00000199476 2528 ntBASIC12.91□□□□□ -0.34
Prpf8Q99PV0 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
Prpf8Q99PV0 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Prpf8Q99PV0 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Prpf8Q99PV0 Gm14701-201ENSMUST00000117156 348 ntBASIC12.91□□□□□ -0.34
Prpf8Q99PV0 Gm5186-201ENSMUST00000218781 920 ntBASIC12.91□□□□□ -0.34
Prpf8Q99PV0 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Prpf8Q99PV0 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Prpf8Q99PV0 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Prpf8Q99PV0 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Prpf8Q99PV0 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Prpf8Q99PV0 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Prpf8Q99PV0 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Prpf8Q99PV0 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Prpf8Q99PV0 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Prpf8Q99PV0 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Prpf8Q99PV0 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Prpf8Q99PV0 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Prpf8Q99PV0 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Prpf8Q99PV0 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Prpf8Q99PV0 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Prpf8Q99PV0 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Prpf8Q99PV0 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC12.9□□□□□ -0.34
Prpf8Q99PV0 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Prpf8Q99PV0 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
Prpf8Q99PV0 Gm26308-201ENSMUST00000157768 69 ntBASIC12.9□□□□□ -0.34
Prpf8Q99PV0 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC12.9□□□□□ -0.34
Prpf8Q99PV0 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Prpf8Q99PV0 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC12.9□□□□□ -0.34
Prpf8Q99PV0 Mir8117-201ENSMUST00000184773 107 ntBASIC12.9□□□□□ -0.34
Prpf8Q99PV0 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Prpf8Q99PV0 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Prpf8Q99PV0 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Prpf8Q99PV0 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Prpf8Q99PV0 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Prpf8Q99PV0 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Prpf8Q99PV0 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Prpf8Q99PV0 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Prpf8Q99PV0 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Prpf8Q99PV0 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC12.9□□□□□ -0.34
Prpf8Q99PV0 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Prpf8Q99PV0 Gm14057-201ENSMUST00000120631 482 ntBASIC12.9□□□□□ -0.34
Prpf8Q99PV0 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC12.9□□□□□ -0.34
Prpf8Q99PV0 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC12.9□□□□□ -0.34
Prpf8Q99PV0 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC12.9□□□□□ -0.34
Prpf8Q99PV0 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC12.9□□□□□ -0.34
Prpf8Q99PV0 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Prpf8Q99PV0 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Prpf8Q99PV0 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Prpf8Q99PV0 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Prpf8Q99PV0 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Prpf8Q99PV0 Gm43702-201ENSMUST00000198772 2546 ntBASIC12.89□□□□□ -0.35
Prpf8Q99PV0 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC12.89□□□□□ -0.35
Prpf8Q99PV0 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC12.89□□□□□ -0.35
Prpf8Q99PV0 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Prpf8Q99PV0 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Prpf8Q99PV0 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Prpf8Q99PV0 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Prpf8Q99PV0 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Prpf8Q99PV0 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Prpf8Q99PV0 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Prpf8Q99PV0 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Prpf8Q99PV0 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Prpf8Q99PV0 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Prpf8Q99PV0 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Prpf8Q99PV0 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Prpf8Q99PV0 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Prpf8Q99PV0 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Prpf8Q99PV0 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Prpf8Q99PV0 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Prpf8Q99PV0 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Prpf8Q99PV0 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC12.89□□□□□ -0.35
Prpf8Q99PV0 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Prpf8Q99PV0 AC225888.1-201ENSMUST00000227184 728 ntBASIC12.89□□□□□ -0.35
Prpf8Q99PV0 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
Prpf8Q99PV0 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Prpf8Q99PV0 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Prpf8Q99PV0 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms