Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rnf111Q99ML9 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Rnf111Q99ML9 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rnf111Q99ML9 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rnf111Q99ML9 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf111Q99ML9 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf111Q99ML9 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf111Q99ML9 AA414768-201ENSMUST00000121924 1257 ntBASIC15.33■□□□□ 0.04
Rnf111Q99ML9 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC15.33■□□□□ 0.04
Rnf111Q99ML9 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf111Q99ML9 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Rnf111Q99ML9 Gm6623-201ENSMUST00000173570 544 ntBASIC15.33■□□□□ 0.04
Rnf111Q99ML9 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf111Q99ML9 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf111Q99ML9 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC15.33■□□□□ 0.04
Rnf111Q99ML9 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
Rnf111Q99ML9 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf111Q99ML9 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf111Q99ML9 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf111Q99ML9 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.33■□□□□ 0.04
Rnf111Q99ML9 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf111Q99ML9 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf111Q99ML9 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Rnf111Q99ML9 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf111Q99ML9 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf111Q99ML9 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Rnf111Q99ML9 Gm8258-201ENSMUST00000055593 1449 ntBASIC15.33■□□□□ 0.04
Rnf111Q99ML9 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf111Q99ML9 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Rnf111Q99ML9 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf111Q99ML9 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf111Q99ML9 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf111Q99ML9 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf111Q99ML9 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf111Q99ML9 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf111Q99ML9 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Rnf111Q99ML9 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf111Q99ML9 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf111Q99ML9 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf111Q99ML9 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Rnf111Q99ML9 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf111Q99ML9 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf111Q99ML9 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf111Q99ML9 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf111Q99ML9 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf111Q99ML9 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf111Q99ML9 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf111Q99ML9 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Rnf111Q99ML9 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf111Q99ML9 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf111Q99ML9 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf111Q99ML9 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf111Q99ML9 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf111Q99ML9 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf111Q99ML9 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
Rnf111Q99ML9 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf111Q99ML9 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rnf111Q99ML9 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf111Q99ML9 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Rnf111Q99ML9 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf111Q99ML9 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf111Q99ML9 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Rnf111Q99ML9 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.31■□□□□ 0.04
Rnf111Q99ML9 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC15.31■□□□□ 0.04
Rnf111Q99ML9 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf111Q99ML9 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Rnf111Q99ML9 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf111Q99ML9 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf111Q99ML9 Gm25016-201ENSMUST00000158399 131 ntBASIC15.31■□□□□ 0.04
Rnf111Q99ML9 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf111Q99ML9 Gm6345-202ENSMUST00000180900 204 ntBASIC15.31■□□□□ 0.04
Rnf111Q99ML9 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Rnf111Q99ML9 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf111Q99ML9 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf111Q99ML9 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Rnf111Q99ML9 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf111Q99ML9 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC15.31■□□□□ 0.04
Rnf111Q99ML9 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf111Q99ML9 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf111Q99ML9 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf111Q99ML9 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf111Q99ML9 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC15.31■□□□□ 0.04
Rnf111Q99ML9 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf111Q99ML9 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf111Q99ML9 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf111Q99ML9 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Rnf111Q99ML9 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf111Q99ML9 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf111Q99ML9 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf111Q99ML9 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf111Q99ML9 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf111Q99ML9 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf111Q99ML9 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rnf111Q99ML9 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf111Q99ML9 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Rnf111Q99ML9 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Rnf111Q99ML9 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf111Q99ML9 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Rnf111Q99ML9 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Rnf111Q99ML9 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms