Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
Nkd1Q99MH6 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC14.92□□□□□ -0.02
Nkd1Q99MH6 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Nkd1Q99MH6 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC14.92□□□□□ -0.02
Nkd1Q99MH6 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC14.92□□□□□ -0.02
Nkd1Q99MH6 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC14.92□□□□□ -0.02
Nkd1Q99MH6 AC134329.2-201ENSMUST00000217897 428 ntBASIC14.92□□□□□ -0.02
Nkd1Q99MH6 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Nkd1Q99MH6 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkd1Q99MH6 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
Nkd1Q99MH6 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Nkd1Q99MH6 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkd1Q99MH6 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkd1Q99MH6 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.92□□□□□ -0.02
Nkd1Q99MH6 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Nkd1Q99MH6 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkd1Q99MH6 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkd1Q99MH6 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Nkd1Q99MH6 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Nkd1Q99MH6 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Nkd1Q99MH6 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkd1Q99MH6 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkd1Q99MH6 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkd1Q99MH6 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC14.91□□□□□ -0.02
Nkd1Q99MH6 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Nkd1Q99MH6 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkd1Q99MH6 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
Nkd1Q99MH6 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Nkd1Q99MH6 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkd1Q99MH6 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkd1Q99MH6 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkd1Q99MH6 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Nkd1Q99MH6 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Nkd1Q99MH6 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkd1Q99MH6 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkd1Q99MH6 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkd1Q99MH6 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkd1Q99MH6 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Nkd1Q99MH6 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
Nkd1Q99MH6 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkd1Q99MH6 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkd1Q99MH6 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkd1Q99MH6 Gm22697-201ENSMUST00000175194 63 ntBASIC14.91□□□□□ -0.02
Nkd1Q99MH6 Gm37722-201ENSMUST00000193757 208 ntBASIC14.91□□□□□ -0.02
Nkd1Q99MH6 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkd1Q99MH6 Gm21559-201ENSMUST00000220638 855 ntBASIC14.91□□□□□ -0.02
Nkd1Q99MH6 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkd1Q99MH6 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkd1Q99MH6 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkd1Q99MH6 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkd1Q99MH6 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkd1Q99MH6 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkd1Q99MH6 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkd1Q99MH6 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC14.91□□□□□ -0.02
Nkd1Q99MH6 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkd1Q99MH6 Gm8587-201ENSMUST00000076538 843 ntBASIC14.91□□□□□ -0.02
Nkd1Q99MH6 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkd1Q99MH6 Gm44616-201ENSMUST00000206417 1732 ntBASIC14.91□□□□□ -0.02
Nkd1Q99MH6 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Nkd1Q99MH6 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkd1Q99MH6 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Nkd1Q99MH6 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkd1Q99MH6 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nkd1Q99MH6 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Nkd1Q99MH6 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkd1Q99MH6 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkd1Q99MH6 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkd1Q99MH6 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkd1Q99MH6 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkd1Q99MH6 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkd1Q99MH6 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.9□□□□□ -0.02
Nkd1Q99MH6 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Nkd1Q99MH6 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC14.9□□□□□ -0.02
Nkd1Q99MH6 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkd1Q99MH6 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkd1Q99MH6 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
Nkd1Q99MH6 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkd1Q99MH6 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkd1Q99MH6 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Nkd1Q99MH6 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkd1Q99MH6 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkd1Q99MH6 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkd1Q99MH6 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkd1Q99MH6 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkd1Q99MH6 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkd1Q99MH6 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.9□□□□□ -0.02
Nkd1Q99MH6 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkd1Q99MH6 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkd1Q99MH6 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkd1Q99MH6 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkd1Q99MH6 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Nkd1Q99MH6 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkd1Q99MH6 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkd1Q99MH6 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Nkd1Q99MH6 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkd1Q99MH6 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkd1Q99MH6 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
Nkd1Q99MH6 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkd1Q99MH6 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Nkd1Q99MH6 Gm10052-201ENSMUST00000168019 960 ntBASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms