Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx6-1Q99MA9 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx6-1Q99MA9 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC14.75□□□□□ -0.05
Nkx6-1Q99MA9 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx6-1Q99MA9 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx6-1Q99MA9 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
Nkx6-1Q99MA9 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx6-1Q99MA9 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx6-1Q99MA9 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.75□□□□□ -0.05
Nkx6-1Q99MA9 Gm45412-201ENSMUST00000210217 2275 ntBASIC14.75□□□□□ -0.05
Nkx6-1Q99MA9 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx6-1Q99MA9 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx6-1Q99MA9 Gm11745-201ENSMUST00000121669 448 ntBASIC14.75□□□□□ -0.05
Nkx6-1Q99MA9 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC14.75□□□□□ -0.05
Nkx6-1Q99MA9 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC14.75□□□□□ -0.05
Nkx6-1Q99MA9 Gm25948-201ENSMUST00000175334 112 ntBASIC14.75□□□□□ -0.05
Nkx6-1Q99MA9 Gm5745-201ENSMUST00000183748 313 ntBASIC14.75□□□□□ -0.05
Nkx6-1Q99MA9 Gm27301-201ENSMUST00000184012 127 ntBASIC14.75□□□□□ -0.05
Nkx6-1Q99MA9 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx6-1Q99MA9 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC14.75□□□□□ -0.05
Nkx6-1Q99MA9 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Nkx6-1Q99MA9 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx6-1Q99MA9 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx6-1Q99MA9 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx6-1Q99MA9 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx6-1Q99MA9 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx6-1Q99MA9 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx6-1Q99MA9 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx6-1Q99MA9 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx6-1Q99MA9 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx6-1Q99MA9 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx6-1Q99MA9 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Nkx6-1Q99MA9 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx6-1Q99MA9 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx6-1Q99MA9 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx6-1Q99MA9 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx6-1Q99MA9 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx6-1Q99MA9 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Nkx6-1Q99MA9 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx6-1Q99MA9 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Nkx6-1Q99MA9 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx6-1Q99MA9 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx6-1Q99MA9 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.74□□□□□ -0.05
Nkx6-1Q99MA9 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx6-1Q99MA9 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC14.74□□□□□ -0.05
Nkx6-1Q99MA9 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx6-1Q99MA9 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.74□□□□□ -0.05
Nkx6-1Q99MA9 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.74□□□□□ -0.05
Nkx6-1Q99MA9 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC14.74□□□□□ -0.05
Nkx6-1Q99MA9 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx6-1Q99MA9 Gm18489-201ENSMUST00000172565 551 ntBASIC14.74□□□□□ -0.05
Nkx6-1Q99MA9 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx6-1Q99MA9 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC14.74□□□□□ -0.05
Nkx6-1Q99MA9 Gm45612-201ENSMUST00000211320 160 ntBASIC14.74□□□□□ -0.05
Nkx6-1Q99MA9 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
Nkx6-1Q99MA9 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx6-1Q99MA9 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC14.74□□□□□ -0.05
Nkx6-1Q99MA9 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx6-1Q99MA9 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx6-1Q99MA9 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx6-1Q99MA9 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx6-1Q99MA9 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx6-1Q99MA9 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx6-1Q99MA9 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
Nkx6-1Q99MA9 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx6-1Q99MA9 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx6-1Q99MA9 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Nkx6-1Q99MA9 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx6-1Q99MA9 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx6-1Q99MA9 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx6-1Q99MA9 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx6-1Q99MA9 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx6-1Q99MA9 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx6-1Q99MA9 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx6-1Q99MA9 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Nkx6-1Q99MA9 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx6-1Q99MA9 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC14.73□□□□□ -0.05
Nkx6-1Q99MA9 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14.73□□□□□ -0.05
Nkx6-1Q99MA9 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC14.73□□□□□ -0.05
Nkx6-1Q99MA9 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx6-1Q99MA9 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx6-1Q99MA9 Gm5177-201ENSMUST00000183092 997 ntBASIC14.73□□□□□ -0.05
Nkx6-1Q99MA9 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC14.73□□□□□ -0.05
Nkx6-1Q99MA9 Gm5626-201ENSMUST00000222151 1058 ntBASIC14.73□□□□□ -0.05
Nkx6-1Q99MA9 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx6-1Q99MA9 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Nkx6-1Q99MA9 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx6-1Q99MA9 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx6-1Q99MA9 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Nkx6-1Q99MA9 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx6-1Q99MA9 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
Nkx6-1Q99MA9 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx6-1Q99MA9 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx6-1Q99MA9 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx6-1Q99MA9 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx6-1Q99MA9 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx6-1Q99MA9 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx6-1Q99MA9 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Nkx6-1Q99MA9 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nkx6-1Q99MA9 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms